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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
ATAC-seq
20
total RNA-seq
16
ChIP-seq
Assay category
81
DNA accessibility
20
Transcription
16
DNA binding
Target of assay
16
histone
16
histone modification
9
narrow histone mark
7
broad histone mark
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
90
bed narrowPeak
64
xls
46
bam
43
bigWig
20
tsv
16
tagAlign
7
fastq
3
bed bed3+
Organism
117
Homo sapiens
Biosample type
64
tissue
30
in vitro differentiated cells
15
primary cell
8
cell line
Organ
64
kidney
15
epithelium
8
embryo
8
liver
7
pancreas
Project
110
AMP
7
HPAP
Genome assembly (visualization)
117
GRCh38
65
hg19
Lab
64
Katalin Susztak, Upenn
46
AMP-T2D consortium
7
Klaus Kaestner, Upenn
month_released!
April, 2018
BIOSAMPLE
ASSAY
117 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
tissue
kidney
64
in vitro differentiated cells
neural progenitor cell
10
7
13
primary cell
hepatocyte
5
3
pancreatic alpha cell
5
pancreatic beta cell
2
cell line
H1-hESC
8
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