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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
116
total RNA-seq
96
ChIP-seq
48
single cell RNA-seq
7
ATAC-seq
Assay category
164
Transcription
96
DNA binding
7
DNA accessibility
Target of assay
91
histone
91
histone modification
58
broad histone mark
33
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
267
bigWig
260
bam
164
tsv
96
bed narrowPeak
96
bigBed narrowPeak
57
fastq
Organism
267
Homo sapiens
Biosample type
208
tissue
59
primary cell
Organ
161
pancreas
44
epithelium
39
blood vessel
39
vasculature
25
brain
15
heart
5
limb
5
musculature of body
4
kidney
3
artery
2
connective tissue
Project
260
AMP
7
HPAP
Genome assembly (visualization)
267
GRCh38
261
hg19
Lab
260
AMP-T2D consortium
7
Klaus Kaestner, Upenn
Audit category:
8
inconsistent ontology term
target.investigated_as!
nucleotide modification
BIOSAMPLE
ASSAY
267 results
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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
ATAC-seq
tissue
islet of Langerhans
116
ascending aorta
13
temporal lobe
13
angular gyrus
12
thoracic aorta
12
+ See 7 more…
primary cell
pancreatic alpha cell
7
5
pancreatic beta cell
9
2
pancreatic acinar cell
5
kidney epithelial cell
4
pancreatic delta cell
4
+ See 11 more…
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