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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
83
ChIP-seq
5
total RNA-seq
Assay category
83
DNA binding
5
Transcription
Target of assay
42
transcription factor
36
histone
36
histone modification
19
broad histone mark
17
narrow histone mark
5
control
4
RNA binding protein
3
chromatin remodeller
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
77
December, 2017
72
September, 2018
67
November, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
16
March, 2020
14
October, 2017
12
May, 2023
11
January, 2019
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
December, 2018
3
June, 2018
3
September, 2020
March, 2019
1
March, 2023
Available data
88
bam
88
fastq
83
bigWig
78
bed narrowPeak
56
bigBed narrowPeak
15
bed bed3+
5
tsv
Organism
88
Homo sapiens
Biosample type
42
tissue
38
in vitro differentiated cells
5
cell line
3
stem cell
Organ
55
liver
16
epithelium
15
blood
bodily fluid
9
embryo
6
spleen
Project
88
AMP
Genome assembly (visualization)
88
GRCh38
88
hg19
Lab
88
AMP-T2D consortium
Audit category:
27
inconsistent control
2
inconsistent ontology term
Audit category:
11
inconsistent control read length
month_released!
March, 2019
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
88 results
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Clear Filters
ChIP-seq
total RNA-seq
tissue
liver
29
right lobe of liver
7
spleen
6
in vitro differentiated cells
hepatocyte
14
pancreatic endoderm
7
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
cell line
HepG2
5
stem cell
hESC
3
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