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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
83
ChIP-seq
8
ATAC-seq
Assay category
83
DNA binding
8
DNA accessibility
Target of assay
42
transcription factor
36
histone
36
histone modification
20
broad histone mark
16
narrow histone mark
5
control
4
RNA binding protein
3
chromatin remodeller
Date released
568
February, 2021
280
November, 2017
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
91
fastq
90
bam
86
bigWig
84
bed narrowPeak
56
bigBed narrowPeak
15
bed bed3+
6
tagAlign
4
bed broadPeak
Organism
91
Homo sapiens
Biosample type
50
tissue
38
in vitro differentiated cells
3
stem cell
Organ
50
liver
16
epithelium
9
embryo
7
brain
5
pancreas
1
adipose tissue
1
connective tissue
1
spleen
Project
91
AMP
Genome assembly (visualization)
91
GRCh38
90
hg19
Lab
90
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
27
inconsistent control
2
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
11
inconsistent control read length
month_released!
January, 2019
May, 2021
BIOSAMPLE
ASSAY
91 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
liver
29
right lobe of liver
7
brain
6
body of pancreas
4
cerebellum (Hemisphere)
1
+ See 3 more…
in vitro differentiated cells
hepatocyte
14
pancreatic endoderm
7
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
stem cell
hESC
3
See all biosamples
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