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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
11
total RNA-seq
8
ATAC-seq
Assay category
16
DNA binding
11
Transcription
8
DNA accessibility
Target of assay
16
histone
16
histone modification
10
broad histone mark
6
narrow histone mark
Date released
568
February, 2021
280
November, 2017
274
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
97
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
72
September, 2018
68
December, 2017
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
30
December, 2018
26
January, 2019
21
February, 2018
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
35
bigWig
35
fastq
34
bam
22
bed narrowPeak
11
tsv
6
bigBed narrowPeak
6
tagAlign
4
bed broadPeak
Organism
35
Homo sapiens
Biosample type
21
in vitro differentiated cells
14
tissue
Organ
embryo
7
brain
5
pancreas
1
adipose tissue
1
connective tissue
1
spleen
Project
35
AMP
Genome assembly (visualization)
35
GRCh38
34
hg19
Lab
34
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
3
missing controlled_by
Audit category:
2
inconsistent control read length
organ_slims!
embryo
BIOSAMPLE
ASSAY
35 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
in vitro differentiated cells
definitive endodermal cell
2
2
embryonic stem cell
2
2
endocrine cell
2
2
posterior foregut
2
2
primitive gut cell
2
2
+ See 1 more…
tissue
brain
6
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
+ See 1 more…
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