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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
116
total RNA-seq
48
single cell RNA-seq
8
ATAC-seq
5
ChIP-seq
Assay category
164
Transcription
8
DNA accessibility
5
DNA binding
Target of assay
6
histone
6
histone modification
5
broad histone mark
narrow histone mark
Date released
568
February, 2021
252
November, 2017
234
May, 2021
199
June, 2019
197
August, 2017
188
May, 2020
164
July, 2018
96
August, 2021
88
October, 2019
79
July, 2019
79
November, 2018
63
May, 2019
62
December, 2017
57
September, 2018
53
November, 2019
49
April, 2018
42
April, 2019
36
October, 2018
35
February, 2023
30
December, 2018
25
May, 2024
23
February, 2018
23
January, 2019
13
March, 2020
13
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
177
bigWig
176
bam
164
tsv
63
fastq
11
bed narrowPeak
5
bigBed narrowPeak
5
tagAlign
3
bed broadPeak
Organism
177
Homo sapiens
Biosample type
129
tissue
48
primary cell
Organ
158
pancreas
33
epithelium
6
brain
3
connective tissue
1
adipose tissue
1
spleen
Project
177
AMP
Genome assembly (visualization)
177
GRCh38
176
hg19
Lab
176
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
6
inconsistent ontology term
Audit category:
2
missing controlled_by
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
177 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ATAC-seq
ChIP-seq
tissue
islet of Langerhans
116
1
brain
5
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
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primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
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