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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
230
total RNA-seq
19
ChIP-seq
16
small RNA-seq
7
WGBS
6
ATAC-seq
3
single cell RNA-seq
Assay category
249
Transcription
19
DNA binding
7
DNA methylation
6
DNA accessibility
Target of assay
19
histone
19
histone modification
19
narrow histone mark
3
control
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
207
May, 2020
207
October, 2019
169
June, 2019
164
July, 2018
105
August, 2021
91
May, 2019
79
November, 2018
77
December, 2017
74
July, 2019
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
14
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
281
bam
281
bigWig
249
tsv
24
bed narrowPeak
19
tagAlign
7
bed bedMethyl
7
bigBed bedMethyl
Organism
281
Homo sapiens
Biosample type
220
tissue
61
primary cell
Organ
169
liver
21
heart
16
connective tissue
12
adipose tissue
12
brain
8
blood vessel
8
vasculature
6
kidney
5
epithelium
musculature of body
4
pancreas
3
artery
1
limb
1
pericardium
Project
236
AMP
45
T1D
Genome assembly (visualization)
346
hg19
281
GRCh38
Lab
236
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
281 results
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Clear Filters
total RNA-seq
ChIP-seq
small RNA-seq
WGBS
ATAC-seq
single cell RNA-seq
tissue
liver
145
19
1
heart left ventricle
2
2
2
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
+ See 18 more…
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
+ See 34 more…
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