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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
268
ChIP-seq
187
DNase-seq
Assay category
268
DNA binding
187
DNA accessibility
Target of assay
208
transcription factor
92
histone
92
histone modification
66
recombinant protein
53
broad histone mark
39
narrow histone mark
RNA binding protein
13
chromatin remodeller
2
other context
2
other post-translational modification
Date released
568
February, 2021
276
May, 2021
249
November, 2017
242
August, 2017
207
May, 2020
207
October, 2019
206
June, 2019
164
July, 2018
105
August, 2021
91
May, 2019
79
July, 2019
73
December, 2017
72
September, 2018
61
April, 2019
58
November, 2018
56
November, 2019
49
April, 2018
36
October, 2018
35
February, 2023
35
May, 2024
31
February, 2018
28
December, 2018
20
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
March, 2019
1
March, 2023
Available data
455
bam
455
bed narrowPeak
455
bigBed narrowPeak
454
bigWig
236
bed broadPeak
231
bigBed broadPeak
192
fastq
187
bed bed3+
54
tagAlign
Organism
455
Homo sapiens
Biosample type
220
tissue
189
cell line
46
primary cell
Organ
191
liver
90
brain
79
kidney
41
musculature of body
32
heart
32
limb
18
epithelium
18
ureter
14
connective tissue
9
vasculature
6
blood vessel
5
eye
4
pancreas
2
artery
1
adipose tissue
Project
455
AMP
Genome assembly (visualization)
455
GRCh38
430
hg19
Lab
455
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
13
inconsistent control read length
1
inconsistent control run_type
month_released!
March, 2019
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
455 results
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Clear Filters
ChIP-seq
DNase-seq
tissue
heart
18
muscle of arm
17
layer of hippocampus
16
caudate nucleus
12
1
kidney
13
+ See 38 more…
cell line
HepG2
189
primary cell
skeletal muscle satellite cell
7
mesenchymal stem cell
6
cardiac fibroblast
2
3
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
+ See 17 more…
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