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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
5
total RNA-seq
3
DNase-seq
1
ATAC-seq
Assay category
21
DNA binding
5
Transcription
4
DNA accessibility
Target of assay
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
2
RNA binding protein
2
transcription factor
Date released
61
September, 2018
33
April, 2018
33
July, 2018
26
February, 2021
23
October, 2019
18
June, 2019
17
August, 2017
16
December, 2017
13
November, 2019
9
May, 2021
7
August, 2020
5
December, 2019
5
July, 2019
5
September, 2017
4
May, 2019
4
November, 2017
3
August, 2018
3
August, 2021
3
March, 2020
3
September, 2020
2
October, 2018
1
June, 2018
Available data
30
bam
29
bigWig
25
bed narrowPeak
17
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
5
tsv
4
fastq
2
bed bed3+
Organism
30
Homo sapiens
Biosample type
25
primary cell
5
cell line
Organ
225
liver
141
brain
52
limb
38
vasculature
36
blood vessel
31
nerve
30
epithelium
22
kidney
21
artery
14
pancreas
12
vein
9
heart
2
musculature of body
1
pituitary gland
Project
27
AMP
3
T1D
Genome assembly (visualization)
39
hg19
30
GRCh38
Lab
30
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
30 results
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Clear Filters
ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
primary cell
endothelial cell of umbilical vein
10
2
epithelial cell of proximal tubule
6
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
Liver fetal (hepatocyte)
1
+ See 2 more…
cell line
EndoC_BH1
1
2
glomerular visceral epithelial cell
1
1
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