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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
343
ChIP-seq
9
DNase-seq
7
WGBS
Assay category
343
DNA binding
9
DNA accessibility
7
DNA methylation
Target of assay
267
transcription factor
81
recombinant protein
73
histone
73
histone modification
52
RNA binding protein
45
broad histone mark
28
narrow histone mark
20
chromatin remodeller
5
other context
5
other post-translational modification
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
September, 2020
2
March, 2019
1
March, 2023
Available data
359
bam
358
bigWig
352
bed narrowPeak
352
bigBed narrowPeak
302
fastq
64
bed broadPeak
59
bigBed broadPeak
54
tagAlign
9
bed bed3+
7
bed bedMethyl
7
bigBed bedMethyl
Organism
359
Homo sapiens
Biosample type
274
cell line
79
tissue
6
primary cell
Organ
269
liver
65
brain
12
blood
12
bodily fluid
6
pancreas
6
spleen
4
epithelium
4
vasculature
2
blood vessel
1
adipose tissue
1
connective tissue
Project
359
AMP
Genome assembly (visualization)
359
GRCh38
352
hg19
Lab
359
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
22
inconsistent control read length
6
inconsistent control run_type
month_released!
September, 2020
BIOSAMPLE
ASSAY
359 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
cell line
HepG2
261
1
GM12878
12
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
+ See 8 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
See all biosamples
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