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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
8
DNase-seq
5
WGBS
Assay category
60
DNA binding
8
DNA accessibility
5
DNA methylation
Target of assay
60
transcription factor
21
RNA binding protein
15
recombinant protein
7
chromatin remodeller
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
207
May, 2020
185
October, 2019
164
July, 2018
130
June, 2019
92
May, 2019
77
December, 2017
73
July, 2019
73
November, 2018
72
September, 2018
57
November, 2019
49
April, 2018
47
October, 2018
46
April, 2019
41
August, 2021
40
May, 2024
35
February, 2023
31
February, 2018
27
December, 2018
20
January, 2019
16
March, 2020
13
October, 2017
7
August, 2020
7
September, 2017
6
November, 2020
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
1
May, 2023
Available data
73
bam
73
bigWig
73
fastq
68
bed narrowPeak
68
bigBed narrowPeak
8
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
5
bed bedMethyl
5
bigBed bedMethyl
Organism
73
Homo sapiens
Biosample type
57
cell line
16
tissue
Organ
52
liver
12
blood
12
bodily fluid
6
pancreas
spleen
2
brain
1
adipose tissue
1
connective tissue
Project
73
AMP
Genome assembly (visualization)
73
GRCh38
67
hg19
Lab
73
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
month_released!
December, 2019
organ_slims!
kidney
spleen
BIOSAMPLE
ASSAY
73 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
cell line
HepG2
44
1
GM12878
12
tissue
liver
4
2
body of pancreas
2
2
brain
2
pancreas
2
omental fat pad
1
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