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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
79
ChIP-seq
54
total RNA-seq
45
ATAC-seq
4
DNase-seq
Assay category
79
DNA binding
54
Transcription
49
DNA accessibility
Target of assay
56
transcription factor
21
histone
21
histone modification
14
broad histone mark
11
RNA binding protein
10
chromatin remodeller
7
narrow histone mark
Date released
64
February, 2021
35
February, 2023
27
December, 2018
21
October, 2019
15
January, 2019
12
November, 2018
3
July, 2019
3
May, 2019
2
June, 2019
Available data
147
bam
139
bigWig
128
bed narrowPeak
79
bigBed narrowPeak
54
fastq
54
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
Organism
182
Homo sapiens
Biosample type
118
cell line
62
tissue
2
primary cell
Organ
635
pancreas
566
connective tissue
531
liver
424
adipose tissue
294
epithelium
266
heart
217
brain
205
kidney
191
vasculature
187
blood vessel
128
artery
96
limb
66
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
182
AMP
Genome assembly (visualization)
182
GRCh38
148
hg19
Lab
182
AMP-T2D consortium
Audit category:
1
inconsistent control
target.investigated_as!
nucleotide modification
BIOSAMPLE
ASSAY
182 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
4
52
8
GM12878
54
tissue
coronary artery
3
36
2
tibial artery
18
1
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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