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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 73ChIP-seq
  • 58total RNA-seq
  • 46ATAC-seq
  • 9DNase-seq
  • 1WGBS
Assay category
  • 73DNA binding
  • 58Transcription
  • 55DNA accessibility
  • 1DNA methylation
Target of assay
  • 65histone
  • 65histone modification
  • 41broad histone mark
  • 24narrow histone mark
  • 8transcription factor
  • 4RNA binding protein
Date released
  • 64February, 2021
  • 39May, 2019
  • 35February, 2023
  • 33October, 2019
  • 8July, 2019
  • 5June, 2019
  • 2November, 2017
  • 1March, 2020
Available data
  • 152bam
  • 144bigWig
  • 128bed narrowPeak
  • 78bigBed narrowPeak
  • 58tsv
  • 11bed broadPeak
  • 11bigBed broadPeak
  • 9bed bed3+
  • 4tagAlign
  • 2fastq
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 187Homo sapiens
Biosample type
  • 105tissue
  • 64cell line
  • 18primary cell
Organ
  • 635pancreas
  • 566connective tissue
  • 531liver
  • 424adipose tissue
  • 294epithelium
  • 266heart
  • 217brain
  • 205kidney
  • 191vasculature
  • 187blood vessel
  • 128artery
  • 96limb
  • 66bone element
  • 54blood
  • 54bodily fluid
  • 53musculature of body
  • 31nerve
  • 29embryo
  • 18ureter
  • 16spleen
  • 12vein
  • 8skeleton
  • 6eye
  • 1pericardium
  • 1pituitary gland
Project
  • 187AMP
Genome assembly (visualization)
  • 187GRCh38
  • 159hg19
Lab
  • 187AMP-T2D consortium
BIOSAMPLE
ASSAY

187 results

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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
WGBS
tissue
coronary artery3362
tibial artery1812
ascending aorta1311
thoracic aorta1221
aorta1111
cell line
smooth muscle cell of the coronary artery4528
primary cell
endothelial cell of umbilical vein102
brain microvascular endothelial cell21
endothelial cell of coronary artery1
kidney capillary endothelial cell1
smooth muscle cell of the coronary artery1
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