Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
157
accessible chromatin
89
chromatin state
67
target gene predictions
9
gene expression
8
eQTL
6
Fine-mapped variants
6
binding sites
4
histone modifications
2
caQTL
Date released
177
November, 2021
87
September, 2022
34
February, 2024
15
January, 2020
6
January, 2022
6
March, 2020
6
October, 2019
3
August, 2021
3
May, 2022
2
February, 2020
2
February, 2023
2
November, 2020
2
September, 2018
1
February, 2021
1
May, 2020
1
November, 2019
Available data
236
bed bed3+
159
bigWig
89
bed bed9
17
tsv
3
bigBed bed9
Organism
348
Homo sapiens
Biosample type
300
primary cell
37
tissue
6
cell line
5
in vitro differentiated cells
Organ
234
epithelium
brain
122
connective tissue
105
kidney
96
musculature of body
93
heart
87
vasculature
embryo
80
lung
79
intestine
78
limb
74
blood vessel
61
pancreas
60
liver
58
uterus
53
bodily fluid
51
blood
47
skin of body
43
large intestine
37
extraembryonic component
33
stomach
28
artery
25
adrenal gland
24
small intestine
23
adipose tissue
23
bone element
20
mammary gland
19
placenta
16
eye
16
ureter
14
esophagus
14
prostate gland
13
gonad
13
spinal cord
12
thymus
11
nerve
11
skeleton
10
penis
8
lymph node
8
spleen
7
ovary
7
thyroid gland
6
lymphoid tissue
6
testis
5
lymphatic vessel
5
mouth
5
vein
4
bronchus
3
breast
3
vagina
2
bone marrow
2
tongue
2
urinary bladder
1
nose
1
pituitary gland
Project
177
ENCODE
171
AMP
Genome assembly (visualization)
960
hg19
348
GRCh38
2
hg18
organ_slims!
brain
embryo
BIOSAMPLE
TYPE
348 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
chromatin state
target gene predictions
gene expression
eQTL
Fine-mapped variants
binding sites
histone modifications
caQTL
primary cell
fibroblast
16
4
2
pericyte cell
9
1
9
endothelial cell
11
6
1
hepatocyte
7
1
1
5
3
endothelial cell of hepatic sinusoid
6
4
6
+ See 94 more…
tissue
omental fat pad
2
2
1
3
adipose tissue
6
1
subcutaneous adipose tissue
2
2
3
breast epithelium
2
esophagus squamous epithelium
2
+ See 9 more…
cell line
EndoC_BH1
1
GM23248
1
HT1080
1
colon epithelial cell
1
foreskin fibroblast
1
+ See 1 more…
in vitro differentiated cells
adipocyte
2
mesenchymal stem cell
2
hepatocyte
1
See all biosamples
Download