Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
18
accessible chromatin
16
chromatin state
9
gene expression
7
histone modifications
6
binding sites
3
Fine-mapped variants
2
candidate regulatory elements
2
eQTL
1
target gene predictions
Date released
24
February, 2024
20
September, 2022
5
November, 2021
3
August, 2021
3
March, 2020
2
January, 2020
2
May, 2024
1
February, 2020
1
February, 2021
1
January, 2022
1
November, 2019
1
September, 2018
Available data
34
bed bed3+
23
bigWig
16
bed bed9
13
tsv
Organism
64
Homo sapiens
Biosample type
38
primary cell
17
tissue
8
cell line
1
in vitro differentiated cells
Organ
244
epithelium
152
brain
130
connective tissue
105
kidney
96
musculature of body
95
heart
90
vasculature
80
embryo
80
lung
79
intestine
78
limb
74
blood vessel
62
liver
61
pancreas
58
uterus
53
bodily fluid
51
blood
47
skin of body
43
large intestine
37
extraembryonic component
33
stomach
28
artery
25
adrenal gland
24
small intestine
23
adipose tissue
23
bone element
20
mammary gland
19
placenta
16
eye
16
ureter
14
esophagus
14
prostate gland
13
gonad
13
spinal cord
12
thymus
11
nerve
11
skeleton
10
penis
8
lymph node
lymphatic vessel
8
spleen
7
ovary
7
thyroid gland
6
lymphoid tissue
6
testis
5
mouth
5
vein
4
bronchus
breast
3
vagina
2
bone marrow
2
tongue
2
urinary bladder
1
nose
1
pituitary gland
Project
59
AMP
5
ENCODE
Genome assembly (visualization)
135
hg19
64
GRCh38
2
hg18
organ_slims!
breast
lymphatic vessel
BIOSAMPLE
TYPE
64 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
chromatin state
gene expression
histone modifications
binding sites
Fine-mapped variants
candidate regulatory elements
eQTL
target gene predictions
primary cell
hepatocyte
7
1
5
3
1
1
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
2
1
1
tissue
liver
2
7
1
right lobe of liver
1
3
1
tongue
2
cell line
HepG2
1
1
4
HuH-7
1
HuH-7.5
1
in vitro differentiated cells
hepatocyte
1
Download