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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
5
ChIP-seq
4
total RNA-seq
2
small RNA-seq
1
WGBS
Assay category
33
DNA accessibility
6
Transcription
5
DNA binding
1
DNA methylation
Target of assay
13
histone
13
histone modification
broad histone mark
5
narrow histone mark
Date released
37
June, 2019
5
July, 2019
2
March, 2020
1
May, 2019
Available data
45
bam
45
bigWig
38
bed narrowPeak
38
bigBed narrowPeak
33
bed bed3+
33
bed broadPeak
33
bigBed broadPeak
6
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
45
Homo sapiens
Biosample type
38
tissue
7
primary cell
Organ
566
pancreas
550
connective tissue
503
liver
424
adipose tissue
254
epithelium
209
heart
190
kidney
156
brain
150
vasculature
146
blood vessel
114
artery
66
bone element
62
limb
54
blood
54
bodily fluid
45
musculature of body
25
embryo
18
ureter
15
nerve
12
spleen
8
skeleton
vein
6
eye
1
pericardium
1
pituitary gland
Project
45
AMP
Genome assembly (visualization)
57
hg19
45
GRCh38
Lab
45
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
vein
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
45 results
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DNase-seq
ChIP-seq
total RNA-seq
small RNA-seq
WGBS
tissue
muscle of arm
17
muscle of leg
13
1
1
psoas muscle
2
skeletal muscle tissue
1
1
forelimb muscle
1
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primary cell
skeletal muscle satellite cell
3
1
1
skeletal muscle cell
1
1
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