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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 33DNase-seq
  • 13ChIP-seq
  • 4total RNA-seq
  • 2small RNA-seq
  • 1WGBS
Assay category
  • 33DNA accessibility
  • 13DNA binding
  • 6Transcription
  • 1DNA methylation
Target of assay
  • 13histone
  • 13histone modification
  • 8broad histone mark
  • 5narrow histone mark
Date released
  • 41June, 2019
  • 5July, 2019
  • 5May, 2019
  • 2March, 2020
Available data
  • 53bam
  • 53bigWig
  • 46bed narrowPeak
  • 46bigBed narrowPeak
  • 33bed bed3+
  • 33bed broadPeak
  • 33bigBed broadPeak
  • 6tsv
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 53Homo sapiens
Biosample type
  • 42tissue
  • 11primary cell
Organ
  • 635pancreas
  • 566connective tissue
  • 531liver
  • 424adipose tissue
  • 294epithelium
  • 266heart
  • 217brain
  • 205kidney
  • 191vasculature
  • 187blood vessel
  • 128artery
  • 96limb
  • 66bone element
  • 54blood
  • 54bodily fluid
  • 53musculature of body
  • 31nerve
  • 29embryo
  • 18ureter
  • 16spleen
  • 12vein
  • 8skeleton
  • 6eye
  • 1pericardium
  • 1pituitary gland
Project
  • 53AMP
Genome assembly (visualization)
  • 73hg19
  • 53GRCh38
Lab
  • 53AMP-T2D consortium
Audit category:
  • 8inconsistent ontology term
BIOSAMPLE
ASSAY

53 results

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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
small RNA-seq
WGBS
tissue
muscle of leg1351
muscle of arm17
psoas muscle2
skeletal muscle tissue11
forelimb muscle1
primary cell
skeletal muscle satellite cell711
skeletal muscle cell11
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