Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 32chromatin state
  • 25accessible chromatin
  • 9Fine-mapped variants
  • 6binding sites
  • 6eQTL
  • 4gene expression
  • 3caQTL
  • 3candidate regulatory elements
  • 1histone modifications
  • 1target gene predictions
Date released
  • 25September, 2022
  • 14February, 2024
  • 14January, 2020
  • 9March, 2020
  • 6November, 2021
  • 4February, 2023
  • 3February, 2020
  • 3January, 2022
  • 3May, 2024
  • 3November, 2019
  • 2May, 2020
  • 2October, 2019
  • 1February, 2021
  • 1May, 2019
Available data
  • 42bed bed3+
  • 32bed bed9
  • 26bigWig
  • 16tsv
  • 8bigBed bed9
Organism
  • 90Homo sapiens
Collection Tags
  • 24EpiMap
  • 16DGA
  • 12GTEx
  • 7AMP
  • 6T2DKP
  • 4CMDGA
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
  • 2FNIH_projects-heart
  • 1FNIH_projects-liver
Biosample type
  • 50primary cell
  • 39tissue
  • 1cell line
Organ
  • 243epithelium
  • 152brain
  • 130connective tissue
  • 105kidney
  • 96musculature of body
  • 95heart
  • 90vasculature
  • 80embryo
  • 80lung
  • 79intestine
  • 78limb
  • 74blood vessel
  • 62liver
  • 61pancreas
  • 58uterus
  • 53bodily fluid
  • 51blood
  • 47skin of body
  • 43large intestine
  • 37extraembryonic component
  • 33stomach
  • 28artery
  • 25adrenal gland
  • 24small intestine
  • 23adipose tissue
  • 23bone element
  • 20mammary gland
  • 19placenta
  • 16eye
  • 16ureter
  • 14esophagus
  • 14prostate gland
  • 13gonad
  • 13spinal cord
  • 12thymus
  • 11nerve
  • 11skeleton
  • 10penis
  • 8lymph node
  • 8lymphatic vessel
  • 8spleen
  • 7ovary
  • 7thyroid gland
  • 6lymphoid tissue
  • 6testis
  • 5mouth
  • 5vein
  • 4bronchus
  • 3breast
  • 3vagina
  • 2bone marrow
  • 2tongue
  • 2urinary bladder
  • 1nose
  • 1pituitary gland
Project
  • 84AMP
  • 6ENCODE
Genome assembly (visualization)
  • 207hg19
  • 90GRCh38
BIOSAMPLE
TYPE

90 results

search-icontable-tab-icon
Clear Filters
chromatin state
accessible chromatin
Fine-mapped variants
binding sites
eQTL
gene expression
caQTL
candidate regulatory elements
histone modifications
target gene predictions
primary cell
endothelial cell of hepatic sinusoid664
endothelial cell of lymphatic vessel231
endothelial cell of umbilical vein41
cardiac fibroblast3
brain microvascular endothelial cell11
tissue
coronary artery33321
tibial artery3232
ascending aorta3131
aorta4
thoracic aorta31
cell line
smooth muscle cell of the coronary artery1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego