Experiment Matrix

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BIOSAMPLE

	ASSAY
2324 results Clear Filters	total RNA-seq	ChIP-seq	ATAC-seq	DNase-seq	single cell RNA-seq	small RNA-seq	WGBS	Hi-C	snATAC-seq
tissue
adipose tissue	382						2
islet of Langerhans	260	9	22	1	6
liver	147	38		2		1
kidney			75	13
bone tissue	58
coronary artery		1	36	2
heart	4			18		1	1
body of pancreas	2	9	4	4		2	2
muscle of arm				17
brain	1			14
heart left ventricle	3	5	2	3			2
muscle of leg				13			1
white adipose tissue		12
omental fat pad	4	3	1	2		1
renal cortex interstitium				11
renal pelvis				10
right kidney				10
spleen		6	1	1			2
subcutaneous adipose tissue	6	2	1			1
left kidney				9
right lobe of liver	2	2	1	1		2
tibial nerve	4		1	2
left cardiac atrium		5		1
pancreas	1	1		2			2
right atrium auricular region	2	1	1	2
frontal cortex	1			2		1
heart right ventricle	1			1			2
left renal cortex interstitium				4
left renal pelvis				4
right renal pelvis				4
thoracic aorta	2	1	1
ascending aorta	1	1		1
cerebellum (Hemisphere)			1	1		1
occipital lobe	1			1		1
retina				3
right renal cortex interstitium				3
skeletal muscle tissue	1					1			1
tibial artery			1	2
visceral abdominal adipose tissue	3
aorta	1						1
diencephalon	1					1
metanephros	1					1
parietal lobe	1					1
psoas muscle	2
temporal lobe	1					1
Ammon's horn				1
adipose tissue(adipose white tissue)			1
cardiac atrium	1
cardiac ventricle	1
caudate nucleus				1
cerebellar cortex				1
cerebellum	1
distal epiphysis			1
distal epiphysis of femur			1
distal epiphysis of humerus			1
distal epiphysis of tibia			1
forelimb muscle				1
globus pallidus				1
hindlimb muscle				1
inferior parietal cortex				1
medulla oblongata				1
midbrain				1
middle frontal gyrus				1
pons				1
posterior cingulate cortex			1
proximal epiphysis			1
proximal epiphysis of femur			1
proximal epiphysis of humerus			1
proximal epiphysis of tibia			1
putamen				1
right cardiac atrium							1
superior temporal gyrus				1
cell line
HepG2	5	248	1				1
smooth muscle cell of the coronary artery	52	4	8
GM12878		53
EndoC_BH1	33	1	1
H1-hESC	8
RCC 7860 HIF1a re-expression	1	3
RCC 7860 HIF2a over-expression	1	2
RCC 7860 vector	1	2
Panc1				1				1
early embryonic cell	2
glomerular visceral epithelial cell	1			1
iPSC derived cell line		1
primary cell
monocyte	53		13
pancreatic alpha cell	10		13		12
pancreatic beta cell	10		10		12
pancreatic acinar cell	4		5		12
pancreatic ductal cell	4		4		10
pancreatic delta cell					11
pancreatic polypeptide-secreting cell					9
osteoblast	5		2	1
pancreatic cell					7
hepatocyte	5			1
mesenchymal cell					6
cardiac fibroblast		1		3
pancreatic stellate cell					4
epithelial cell of proximal tubule	1	1		1
kidney epithelial cell	1	1		1
kidney tubule cell	1			2
B cell	2
CD8-positive, alpha-beta T cell	2
T follicular helper cell	2
T-helper 1 cell	2
T-helper 17 cell	2
T-helper 2 cell	2
astrocyte of the cerebellum		1		1
brain microvascular endothelial cell		1		1
cardiac muscle cell		1		1
central memory CD8-positive, alpha-beta T cell	2
cerebellar granule cell					2
choroid plexus epithelial cell		1		1
co-expressing pancreatic endocrine cell					2
effector CD4-positive, alpha-beta T cell	2
effector T cell	2
effector memory CD8-positive, alpha-beta T cell	2
endothelial cell					2
endothelial cell of umbilical vein				2
enteroendocrine cell					2
gamma-delta T cell	2
glomerular endothelial cell	1			1
glomerular visceral epithelial cell				2
kidney glomerular epithelial cell	1			1
mast cell					2
mature natural killer cell	2
memory B cell	2
memory T cell	2
memory regulatory T cell	2
mesenchymal stem cell of adipose	1					1
naive B cel	2
naive regulatory T cell	2
naive thymus-derived CD8-positive, alpha-beta T cell	2
pancreatic epsilon cell					2
regulatory T cell	2
renal cortical epithelial cell	1			1
retinal pigment epithelial cell		1		1
skeletal muscle myoblast	1	1
skeletal muscle satellite cell	1					1
unclassified exocrine cell					2
unclassified pancreatic endocrine cell					2
Heart fetal (cardiac muscle cell)			1
Liver fetal (hepatocyte)			1
Purkinje cell					1
astrocyte of the hippocampus				1
brain pericyte				1
cardiac atrium fibroblast	1
cardiac ventricle fibroblast	1
chondrocytes								1
embryonic stem cell	1
endothelial cell of coronary artery	1
hepatic stellate cell				1
immature natural killer cell	1
kidney capillary endothelial cell				1
mesangial cell	1
myeloid dendritic cell	1
natural killer cell	1
pericardium fibroblast	1
plasma cell	1
plasmacytoid dendritic cell	1
skeletal muscle cell				1
smooth muscle cell of the brain vasculature				1
smooth muscle cell of the coronary artery	1
in vitro differentiated cells
cardiomyocytes	59	3
adipocyte	4	23		1
cardiac precursors (cardiac muscle cell)	19		1
neural progenitor cell	7		10
induced pluripotent stem cell	9
pancreatic endoderm	4	4
Pancreatic progenitors (progenitor cell of endocrine pancreas)			5
definitive endodermal cell	2	3
primitive gut cell	2	3
cardiomyocytes (cardiac muscle cell)	3		1
Posterior foregut		3
embryonic stem cell	2
endocrine cell	2
hepatocyte		2
posterior foregut	2
cardiac fibroblast	1
endothelial cell	1
hematopoietic multipotent progenitor cell	1
intermediate cardiomyocytes	1
intermediate endothelial cell	1
intermediate smooth muscle cell	1
islet precursor cell	1
lymphocyte of B lineage (iPSC)	1
mesodermal cell (lineage marker-negative)	1
mesodermal cell (pacemaker intermediate)	1
pancreatic PP cell		1
smooth muscle cell	1
stem cell	1
stem cell
hESC		1

Experiment Matrix

Assay

Assay category

Target of assay

Date released

Available data

Organism

Biosample type

Organ

Project

Genome assembly (visualization)

Lab

Audit category:

Audit category:

Audit category:

target.investigated_as!

2324 results