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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 392ChIP-seq
Assay category
  • 392DNA binding
Target of assay
  • 804histone modification
  • 803histone
  • 448transcription factor
  • 410narrow histone mark
  • 392broad histone mark
  • 100RNA binding protein
  • 88recombinant protein
  • 34chromatin remodeller
  • 12control
  • 5other context
  • 5other post-translational modification
Date released
  • 58May, 2019
  • 50October, 2019
  • 49August, 2017
  • 45November, 2017
  • 44May, 2021
  • 37April, 2019
  • 20May, 2024
  • 19October, 2018
  • 17September, 2018
  • 15December, 2017
  • 8February, 2018
  • 8June, 2019
  • 7August, 2021
  • 6November, 2019
  • 5October, 2017
  • 4January, 2019
Available data
  • 391bigWig
  • 387bed narrowPeak
  • 372bam
  • 242bigBed narrowPeak
  • 116fastq
  • 102tagAlign
  • 21bed broadPeak
  • 13bigBed broadPeak
  • 12bed bed3+
Organism
  • 388Homo sapiens
Biosample type
  • 242tissue
  • 96primary cell
  • 37in vitro differentiated cells
  • 16cell line
  • 1stem cell
Organ
  • 69pancreas
  • 61brain
  • 57heart
  • 41blood vessel
  • 41vasculature
  • 40epithelium
  • 34limb
  • 28liver
  • 16connective tissue
  • 16nerve
  • 15kidney
  • 14artery
  • 8musculature of body
  • 5vein
  • 4embryo
  • 4spleen
Project
  • 348AMP
  • 44T1D
Genome assembly (visualization)
  • 392GRCh38
  • 371hg19
Lab
  • 328AMP-T2D consortium
  • 44Kyle Gaulton, UCSD
  • 20Patrick T. Ellinor, Broad
Audit category:
  • 14inconsistent ontology term
Audit category:
  • 24missing controlled_by
Audit category:
  • 14inconsistent control read length
  • 2inconsistent assembly
BIOSAMPLE
ASSAY

392 results

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Clear Filters
ChIP-seq
tissue
left cardiac atrium20
tibial nerve16
heart left ventricle15
tibial artery14
body of pancreas11
primary cell
monocyte44
pancreatic endocrine cell11
pancreatic ductal cell6
skeletal muscle myoblast6
endothelial cell of umbilical vein5
in vitro differentiated cells
adipocyte12
hepatocyte7
neural progenitor cell6
pancreatic endoderm4
definitive endodermal cell2
cell line
HepG27
EndoC_BH16
Panc13
stem cell
hESC1
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