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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 448ChIP-seq
Assay category
  • 448DNA binding
Target of assay
  • 804histone modification
  • 803histone
  • 448transcription factor
  • 410narrow histone mark
  • 392broad histone mark
  • 100RNA binding protein
  • 88recombinant protein
  • 34chromatin remodeller
  • 12control
  • 5other context
  • 5other post-translational modification
Date released
  • 204November, 2017
  • 63November, 2018
  • 46August, 2017
  • 42December, 2017
  • 28December, 2018
  • 15October, 2018
  • 14January, 2019
  • 7October, 2019
  • 5April, 2019
  • 5February, 2021
  • 5May, 2019
  • 5May, 2024
  • 4June, 2019
  • 4May, 2021
  • 1November, 2019
Available data
  • 448bigWig
  • 443bam
  • 425bed narrowPeak
  • 412fastq
  • 372bigBed narrowPeak
  • 36bed broadPeak
  • 36bigBed broadPeak
  • 19bed bed3+
  • 9tagAlign
Organism
  • 448Homo sapiens
Biosample type
  • 309cell line
  • 93tissue
  • 37in vitro differentiated cells
  • 9primary cell
Organ
  • 286liver
  • 51blood
  • 51bodily fluid
  • 40connective tissue
  • 19pancreas
  • 17adipose tissue
  • 17heart
  • 9epithelium
  • 9kidney
  • 9vasculature
  • 8blood vessel
  • 6spleen
  • 5artery
  • 3brain
  • 3embryo
  • 1eye
Project
  • 448AMP
Genome assembly (visualization)
  • 487hg19
  • 448GRCh38
Lab
  • 443AMP-T2D consortium
  • 5Patrick T. Ellinor, Broad
Audit category:
  • 28inconsistent control
  • 14inconsistent ontology term
Audit category:
  • 27missing controlled_by
Audit category:
  • 23inconsistent control read length
  • 6inconsistent control run_type
BIOSAMPLE
ASSAY

448 results

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Clear Filters
ChIP-seq
cell line
HepG2245
GM1287851
smooth muscle cell of the coronary artery4
RCC 7860 HIF1a re-expression3
RCC 7860 HIF2a over-expression2
tissue
liver37
white adipose tissue12
body of pancreas9
islet of Langerhans7
spleen6
in vitro differentiated cells
adipocyte22
cardiomyocytes3
pancreatic endoderm3
Posterior foregut2
definitive endodermal cell2
primary cell
astrocyte of the cerebellum1
brain microvascular endothelial cell1
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
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