Annotation Matrix

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BIOSAMPLE

	TYPE
3905 results Clear Filters	target gene predictions	chromatin state	accessible chromatin	eQTL	histone modifications	Fine-mapped variants	candidate regulatory elements	gene expression	caQTL	binding sites
primary cell
monocyte			13	3	84
fibroblast	28		40	2			3
T-cell	62
stimulated activated CD4-positive, alpha-beta T cell	55
CD4-positive, alpha-beta T cell	50		1
macrophage	11		20	7			3		1
endothelial cell	16		20				3		1
smooth muscle cell	18		19				2
activated CD4-positive, alpha-beta T cell	29			1
glutamatergic neuron	10		17
hepatocyte	6	1	11		3		1	5
stimulated activated CD8-positive, alpha-beta memory T cell	27
common myeloid progenitor, CD34-positive	12	13
CD8-positive, alpha-beta T cell	23		1
GABAergic neuron			22
astrocyte	4	1	17
pericyte cell	9	1	9				2
B cell	6	8	3				3
keratinocyte	9	2	7
endothelial cell of hepatic sinusoid			6					4		6
naive thymus-derived CD4-positive, alpha-beta T cell	15			1
activated CD8-positive, alpha-beta memory T cell	15
activated T-cell	15
pericyte	7		8
CD4-positive, alpha-beta memory T cell	5	9
naive thymus-derived CD8-positive, alpha-beta T cell	13			1
natural killer cell	7	3		1			3
T-helper 1 cell	9	3		1
T-helper 2 cell	9	3		1
thyroid follicular cell	7		6
CD14-positive monocyte	8	4
T cell		4	6	2
endothelial cell of lymphatic vessel	4		5				3
excitatory neuron			12
CD8-positive, alpha-beta memory T cell	4	7
T-helper 17 cell	7	3		1
erythroblast	3		8
cell of skeletal muscle	5		5
progenitor cell	5		5
endocardial cell	3		4				2
adrenal gland glandular cell	4		4
medium spiny neuron			8
muscle precursor cell	4		4
naive B cell	8
regular ventricular cardiac myocyte	3		3				2
suppressor macrophage	8
trophoblast cell	4	4
vip GABAergic cortical interneuron			8
L2/3 intratelencephalic projecting glutamatergic neuron			7
activated naive CD4-positive, alpha-beta T cell	7
endothelial cell of umbilical vein	2	4	1
hepatic stellate cell	2	1	3				1
megakaryocyte	3		4
mesothelial cell	3		4
oligodendrocyte	1		6
skeletal muscle satellite cell	1	2	4
L6 intratelencephalic projecting glutamatergic neuron			6
colon epithelial cell	3		3
dermis blood vessel endothelial cell	4	2
double-positive, alpha-beta thymocyte	3		3
endothelial cell of vascular tree	3		3
fibroblast of cardiac tissue	1	3	2
foreskin keratinocyte	2	4
melanocyte	3		3
mononuclear cell		6
olfactory receptor cell	6
oligodendrocyte precursor cell	2		4
regular atrial cardiac myocyte	3		3
retinal pigment epithelial cell	2	1	3
sncg GABAergic interneuron			6
sst GABAergic interneuron			6
CD4-positive, CD25-positive, alpha-beta regulatory T cell	5
L5 intratelencephalic projecting glutamatergic neuron			5
cortical cell of adrenal gland	2		3
enteric neuron	2		3
fibroblast of lung	2	3
foreskin fibroblast	4	1
inflammatory macrophage	5
inhibitory neuron			5
kidney tubule cell	2	2	1
luminal epithelial cell of mammary gland	2	1	2
mammary gland epithelial cell	1	3	1
mast cell	1		1				3
osteoblast	1	1	3
pancreatic acinar cell	1		4
pvalb GABAergic interneuron			5
regulatory T cell		3		2
stromal cell	3		2
type II pneumocyte	2		3
B Cell	2		2
L2/3-6 intratelencephalic projecting glutamatergic cortical neuron			4
L4 intratelencephalic projecting glutamatergic neuron			4
Schwann cell	2		2
activated T-helper 1 cell	4
activated naive CD8-positive, alpha-beta T cell	4
adipocyte			2				2
blood vessel smooth muscle cell	2		2
brain microvascular endothelial cell	2	1	1
bronchial epithelial cell	2	2
central memory CD4-positive, alpha-beta T cell	4
embryonic blood vessel endothelial progenitor cell	2		2
enteric smooth muscle cell	2		2
epithelial cell of esophagus	2	1	1
fast muscle cell	2		2
fibroblast of dermis	1	3
gabaergic neuron	2		2
lung multiciliated epithelial cell	2		2
mature NK T cell	2		2
medial ganglionic eminence derived interneuron	2		2
medullary thymic epithelial cell(myoid Type IIa)	2		2
medullary thymic epithelial cell(myoid)	2		2
memory B cell	3		1
near-projecting glutamatergic cortical neuron			4
pancreatic beta cell			4
pancreatic ductal cell	1		3
parietal cell	2		2
skin fibroblast	1	2	1
slow muscle cell	2		2
smooth muscle cell of the esophagus	2		2
smooth muscle myoblast	2		2
cardiac fibroblast			3
CD4-positive helper T cell			1						2
L4/5 intratelencephalic projecting glutamatergic neuron			3
L6 corticothalamic-projecting glutamatergic cortical neuron			3
L6b glutamatergic cortical neuron			3
Microglia			3
Schwann cell precursor	2		1
activated CD8-positive, alpha-beta T cell	2			1
activated effector memory CD4-positive, alpha-beta T cell	3
amacrine cell	2		1
astrocyte of the cerebellum	1	1	1
astrocyte of the hippocampus	1	1	1
blood cell				3
cardiac fibroblast	3
cholangiocyte	1		2
choroid plexus epithelial cell	1	1	1
ciliated epithelial cell	1		2
dendritic cell	1		1				1
effector memory CD4-positive, alpha-beta T cell	3
effector memory CD8-positive, alpha-beta T cell	3
enterocyte			3
epithelial cell of prostate	1	2
epithelial cell of proximal tubule	1	1	1
fibroblast of the aortic adventitia	1	1							1
foreskin melanocyte	2	1
glomerular endothelial cell	1	1	1
immature natural killer cell	3
kidney capillary endothelial cell	1	1	1
kidney epithelial cell	1	1	1
kidney glomerular epithelial cell	1	1	1
lung microvascular endothelial cell	2	1
mammary epithelial cell	3
microglial cell	1		1	1
naive T cell		3
neuron	1		2
neurosphere		3
neutrophil		2		1
pancreatic alpha cell			3
renal cortical epithelial cell	1	1	1
retinal bipolar neuron	1		2
schwann cell	1		2
skeletal muscle cell	1	1	1
skeletal muscle fiber			3
skeletal muscle myoblast	1	2
smooth muscle cell of the brain vasculature	1	1	1
stimulated activated naive CD8-positive, alpha-beta T cell	3
type I pneumocyte	1		2
vascular associated smooth muscle cell	1		2
CD1c-positive myeloid dendritic cell	1	1
CGE interneuron	1		1
Kupffer cell	1		1
Muller cell			2
Purkinje cell			2
T follicular helper cell	1			1
activated CD4-positive, CD25-positive, alpha-beta regulatory T cell	2
activated CD4-positive, alpha-beta memory T cell	2
activated gamma-delta T cell	2
alveolar macrophage	1		1
amniotic stem cell	1	1
astrocyte of the spinal cord	1	1
basal cell	1		1
basal cell of epidermis	1		1
brain pericyte	1		1
cardiac endothelial cell	1		1
cardiac muscle cell	1		1
cell			2
cell of skeletal muscle(extraocular)	1		1
central memory CD8-positive, alpha-beta T cell	2
ciliated cell	1		1
club cell	1		1
colon goblet cell	1		1
corneal epithelial cell	2
cortical thymic epithelial cell	1		1
cycling stromal cell	1		1
dermis lymphatic vessel endothelial cell		2
dermis microvascular lymphatic vessel endothelial cell	2
eccrine cell	1		1
effector CD4-positive, alpha-beta T cell	2
enterochromaffin-like cell	1		1
enterocyte of epithelium of small intestine	1		1
enteroendocrine cel	1		1
enteroglial cell	1		1
epidermal melanocyte	1	1
epidermoblast	1		1
erythroblast(cycling)	1		1
erythroblast(early)	1		1
fat cell	1			1
fetal cardiomyocyte			2
fibroblast of breast		2
fibroblast of gingiva	1	1
fibroblast of mammary gland	1	1
fibroblast of peridontal ligament	1	1
fibroblast of pulmonary artery	1	1
fibroblast of skin of abdomen	2
fibroblast of skin of left biceps	2
fibroblast of skin of left quadriceps	2
fibroblast of skin of scalp	2
fibroblast of the conjunctiva	1	1
fibroblast of upper back skin	2
fibroblast of villous mesenchyme	1	1
foveolar cell of stomach	1		1
glomerular visceral epithelial cell	1	1
granular cell of epidermis	1		1
interstitial cell of Caja	1		1
intestinal tuft cell	1		1
iris pigment epithelial cell	1	1
keratinocyte(interfollicular)	1		1
luteal cell	1		1
medullary thymic epithelial cell(myoid Type I)	1		1
mesangial cell			2
mesothelial cell(epicardial)	1		1
mucous neck cell of gastric gland	1		1
myoepithelial cell	1		1
myoepithelial cell of mammary gland		2
naive t cell	1		1
neural crest cell(sympathoadrenal lineage)	2
neuronal stem cell							2
non keratinizing barrier epithelial cell	1		1
non-pigmented ciliary epithelial cell	1	1
pancreatic A cell	2
pancreatic delta cell	1		1
paneth cell	1		1
peptic cell	1		1
pigmented ciliary epithelial cell	1		1
plasma cell	1		1
pro-B cell	1		1
pulmonary artery endothelial cell	1	1
pulmonary neuroendocrine cell	1		1
radial glial cell	1		1
regular ventricular cardiac myocyte(cycling)	1		1
respiratory goblet cell	1		1
retina horizontal cell	1		1
retinal cone cell	1		1
retinal ganglion cell	1		1
retinal progenitor cell	1		1
retinal rod cell	1		1
skeletal muscle fibroblast	1		1
small intestine goblet cell	1		1
stimulated activated effector memory CD8-positive, alpha-beta T cell	2
stomach neuroendocrine cell	1		1
stromal cell of bone marrow	1	1
tendon cell	1		1
trabecular meshwork cell	1		1
type B pancreatic cell	2
type I cell of adrenal cortex	1		1
type I muscle cell	1		1
type II cell of adrenal cortex	1		1
type II muscle cell	1		1
uterine smooth muscle cell	1		1
ventricular cardiac muscle cell	1		1
Bergmann glial cell			1
D1/D2-hybrid medium spiny neuron			1
Endothelial Cell			1
Lamp5 Lhx6 neuron			1
Leydig cell				1
T-helper 22 cell	1
T-helper 9 cell	1
activated B cell	1
activated T-helper 2 cell	1
activated T-helper 9 cell	1
amnion mesenchymal stem cell		1
amniotic epithelial cell	1
aortic endothelial cell					1
cerebellar granule cell			1
chief cell of parathyroid gland	1
cholinergic neuron			1
chromaffin cell of adrenal gland			1
dedifferentiated amniotic fluid mesenchymal stem cell	1
enteroendocrine cell			1
epithelial cell of amnion		1
erythrocyte							1
extratelencephalic-projecting glutamatergic cortical neuron			1
extravillous trophoblast			1
fetal thymocyte			1
fibro-adipogenic progenitor cell			1
fibroblast of skin of back	1
fibroblast of skin of right biceps	1
fibroblast of skin of right quadriceps	1
gastric goblet cell			1
glial cell			1
goblet cell			1
helper T cell				1
hepatoblast			1
islet of Langerhans			1
lamp5 GABAergic interneuron			1
lung neuroendocrine cell			1
mammary stem cell		1
medullary thymic epithelial cell(neuromuscular)	1
mesenchymal stem cell		1
metanephros			1
myofibroblast cell							1
naive B cel				1
neural cell			1
neuromuscular junction nucleus			1
parietal epithelial cell			1
peripheral neuron			1
photoreceptor cell			1
placental hematopoietic stem cell			1
placental villus capillary endothelial cell			1
pvalb chandelier GABAergic interneuron			1
regular cardiac myocyte		1
sensory neuron				1
smooth muscle cell of the coronary artery									1
sst chodl GABAergic interneuron			1
stimulated activated naive B cell	1
sympathetic neuron			1
trophoblast giant cell			1
type 1 muscle cell			1
type 2a muscle cell			1
type 2x muscle cell			1
ureteric bud			1
tissue
head of caudate nucleus	86
dorsolateral prefrontal cortex	56			1
posterior cingulate gyrus	48
heart	18	21	3
stomach	21	19		1
kidney	14	16	9
placenta	22	14		1
brain	14	18	1	2
muscle of arm	17	16	1
lung	14	16		1
adrenal gland	15	14		1
muscle of leg	13	15	1
small intestine	13	15		1
left lung	15	13
muscle of back	15	13
large intestine	14	13
heart left ventricle	10	8	3	1
right lung	11	11
renal cortex interstitium	11	9	1
right kidney	10	10	1
renal pelvis	10	9	1
thymus	9	11
left kidney	9	9
heart right ventricle	10	5	1
coronary artery	2	3	3	2		3			1
ovary	9	4		1
pancreas	8	2	3	1
spinal cord	6	7		1
tibial nerve	3	4	2	2		3
spleen	5	6	1	1
tibial artery	3	3	2	2		3
body of pancreas	4	4		1		3
liver	2	7	2	1
right atrium auricular region	2	2	2	2		3
ascending aorta	2	3	1	1		3
caudate nucleus	1	3	1	2		3
frontal cortex	2	2	1	2		3
gastrocnemius medialis	6	4
omental fat pad	2	2	2	1		3
right lobe of liver	5	1		1		3
upper lobe of left lung	7	3
cerebellum	1	2	1	2		3
left cardiac atrium	2	6	1
psoas muscle	5	4
putamen	1	1	1	3		3
thyroid gland	4	4		1
transverse colon	4	4		1
retina	3	3	1	1
sigmoid colon	3	5
substantia nigra		2		3		3
testis	4	3		1
Ammon's horn	1	1	1	1		3
Peyer's patch	4	3
adipose tissue		6		1
islet of Langerhans			4	3
left renal cortex interstitium	4	2	1
left renal pelvis	4	2	1
muscle of trunk	3	4
right renal pelvis	4	2	1
subcutaneous adipose tissue			2	2		3
aorta	2	4
right cardiac atrium	3	3
right renal cortex interstitium	3	2	1
amygdala				2		3
anterior cingulate cortex				2		3
hypothalamus				2		3
nucleus accumbens				2		3
skin of body	1	1		3
thoracic aorta	1	3	1
vagina	2	2		1
C1 segment of cervical spinal cord				1		3
angular gyrus		4
breast epithelium	2	2
cerebellum (Hemisphere)				1		3
chorionic villus		4
colonic mucosa	2	2
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))				1		3
endocrine pancreas		4
esophagus muscularis mucosa	1	2		1
eye	2	2
gastrocnemius medialis(Muscle - Skeletal)				1		3
layer of hippocampus		3		1
left ventricle myocardium				1		3
limb	2	2
lower leg skin	2	2
prostate gland	1	2		1
temporal lobe		4
tongue	2	2
uterus	2	1		1
cerebellar cortex	1	1	1
chorion membrane		3
esophagus		2		1
esophagus squamous epithelium	1	2
globus pallidus	1	1	1
lower lobe of left lung	3
medulla oblongata	1	1	1
midbrain	1	1	1
middle frontal gyrus	1	1	1
mucosa of descending colon	3
occipital lobe	1	1	1
pons	1	1	1
skeletal muscle tissue		3
superior temporal gyrus	1	1	1
urinary bladder	1	2
Brodmann (1909) area 46		2
cingulate gyrus		2
duodenal mucosa		2
embryonic facial prominence	1	1
femur	1	1
forelimb muscle	1		1
germinal center	1	1
germinal matrix		2
inferior parietal cortex	1	1
left colon	2
mucosa of rectum		2
muscle layer of colon		2
muscle layer of duodenum		2
pancreatic ductal cell			2
pancreatic stellate cell			2
parathyroid adenoma		2
stomach smooth muscle		2
suprapubic skin	2
trophoblast		2
umbilical cord	1	1
hindlimb muscle			1
Right ventricle myocardium inferior	1
Right ventricle myocardium superior	1
Schwann cell			1
abdominal aorta artery				1
amnion		1
arm bone		1
breast				1
cardiac septum	1
cerebellar hemisphere				1
chorion	1
colon sigmoid				1
cortex				1
cortex of kidney				1
distal epiphysis			1
distal epiphysis of femur			1
distal epiphysis of humerus			1
distal epiphysis of tibia			1
endothelial cell			1
esophagus mucosa				1
fetal heart			1
gastroesophageal sphincter		1
hindlimb muscle	1
left forelimb	1
left hindlimb	1
left lobe of liver	1
left ventricle myocardium inferior	1
left ventricle myocardium superior	1
leg bone		1
lower lobe of right lung	1
mesenteric fat pad	1
minor salivary gland				1
mucosa of gallbladder	1
mucosa of stomach		1
pancreatic A cell			1
pancreatic D cell			1
pancreatic PP cell			1
pancreatic acinar cell			1
pituitary gland				1
posterior vena cava	1
proximal epiphysis			1
proximal epiphysis of femur			1
proximal epiphysis of humerus			1
proximal epiphysis of tibia			1
rectum smooth muscle tissue		1
right forelimb	1
right hindlimb	1
sciatic nerve	1
tissue-resident macrophage			1
type B pancreatic cell			1
upper lobe of right lung	1
ureter	1
visceral abdominal adipose tissue				1
cell line
HeLa-S3	55	3
H1-hESC	37	1
A549	14	18
K562	23	6
HFFc6	20
HCT116	18	1
H9	13	1
MCF-7	7	5
GM12878	7	1
HepG2	2	1	1		4
lymphocyte	6	1
iPSC derived cell line	4			2
lymphoblastoid cell line				6
LNCaP clone FGC	3	2
T47D	3	2
CyT49	4
GM03348	3	1
HUES8	4
Ishikawa	4
SK-N-DZ	2	2
SK-N-SH	2	2
A673	2	1
Caco-2	3
GM18507	2	1
GM19238	2	1
GM19239	2	1
GM19240	2	1
GM23338	2	1
H1	3
HAP-1	2	1
HL-60	2	1
IMR-90	2	1
MCF 10A	3
MG63	2	1
PC-9	2	1
SJCRH30	2	1
SJSA1	2	1
WERI-Rb-1	2	1
WI38	2	1
endometrium adenocarcinoma		3
immortal human breast epithelial cell line cell		3
urothelium cell line	2	1
22Rv1		2
8988T	1	1
A172	1	1
ACHN	1	1
AG20443	1	1
BE2C	2
CMK	1	1
COLO829	1	1
CWRU1	1	1
Caki2	1	1
DND-41	1	1
Daoy	1	1
EH	1	1
EL	1	1
ELF-1	1	1
ELR	1	1
G401	1	1
GM04503	1	1
GM04504	1	1
GM06990	1	1
GM10248	1	1
GM10266	1	1
GM12864	1	1
GM12865	1	1
GM12891	1	1
GM12892	1	1
GM23248	1	1
H4	1	1
H54	1	1
H7	2
HEK293T	1	1
HPDE6-E6E7	1	1
HS-27A	1	1
HS-5	1	1
HT-29	1	1
HT1080	1	1
HuH-7	1	1
HuH-7.5	1	1
KBM-7	1	1
L1-S8	1	1
L1-S8R	1	1
LHCN-M2	1	1
M059J	1	1
MM.1S	1	1
NAMALWA	2
NAMALWA cell		2
NB4	1	1
NCI-H929	1	1
OCI-LY7	1	1
PC-3	1	1
Panc1	1	1
RCC 7860	1	1
RPMI7951	1	1
RPMI8226	1	1
RWPE1	1	1
RWPE2	1	1
SK-MEL-5	1	1
SK-N-MC	1	1
SW480	1	1
iPS DF 19.11	1	1
iPS DF 19.7	1	1
iPS DF 6.9	1	1
iPS-NIHi11	1	1
iPS-NIHi7	1	1
muscle				2
ACC112		1
AG04449	1
AG04449 cell		1
AG04450	1
AG04450 cell		1
AG08395	1
AG08395 cell		1
AG08396	1
AG08396 cell		1
AG09309	1
AG09309 cell		1
AG09319	1
AG09319 cell		1
AG10803	1
AG10803 cell		1
BE(2)-C		1
BJ	1
BJ cell		1
C4-2B		1
C803	1
Caco-2 cell		1
Calu3	1
D341Med	1
D721Med	1
DOHH2		1
ES-I3		1
EndoC_BH1			1
GM08714		1
GM12875		1
GM13976	1
GM13977	1
GM18486	1
GM18505	1
GM18508	1
GM18516	1
GM18522	1
GM19099	1
GM19141	1
GM19193	1
GM19204	1
GM20000	1
H7-hESC		1
HCEC 1CT	1
HEK293		1
HFF-Myc	1
HK-2	1
HK-2 cell		1
HTR-8/SVneo	1
HTR-8/Svneo		1
HUES48		1
HUES6		1
HUES64		1
Jurkat, Clone E6-1	1
KARPAS-422 cell		1
KMS-11		1
KOPT-K1		1
Karpas-422	1
LoVo	1
LoVo cell		1
Loucy		1
NCI-H226	1
NCI-H226 cell		1
NCI-H460	1
NCI-H460 cell		1
NT2-D1 cell		1
NT2/D1	1
OCI-LY1		1
OCI-LY3		1
RCC	1
RKO	1
SU-DHL-6		1
UCSF-4		1
VCaP cell		1
WTC11	1
colon carcinoma		1
colon epithelial cell		1
foreskin fibroblast		1
glomerular visceral epithelial cell			1
iPS DF 4.7	1
iPS DF 4.7 Cell Line		1
iPS-11a		1
iPS-15b		1
iPS-18a		1
iPS-18c		1
iPS-20b		1
medulloblastoma		1
renal cell carcinoma		1
smooth muscle cell of the coronary artery			1
in vitro differentiated cells
neural progenitor cell	1	4	10		13
hematopoietic multipotent progenitor cell	12	10
cardiac muscle cell	2	1	1
endodermal cell	2	2
adipocyte	1	2
mesenchymal stem cell	1	2
Pancreatic progenitors (progenitor cell of endocrine pancreas)			2
bipolar neuron	1	1
brain	2
hepatocyte	1	1
islet precursor cell	1	1
mesendoderm	1	1
mesodermal cell	1	1
mesothelial cell of epicardium	2
muscle cell		2
trophoblast cell	1	1
astrocyte	1
cardiac mesoderm primordium		1
cardiac myoblast	1
cardiac precursors			1
cardiovascular progenitor cell	1
chondrocyte	1
ecto neural progenitor cell	1
ectodermal cell		1
endothelial cell	1
excitatory neuron			1
glutamatergic neuron	1
hippocampal neuron			1
lower motor neuron			1
myocyte	1
myotube	1
nephron progenitor cell	1
neural cell		1
neural crest cell	1
neuron		1
neuronal stem cell	1
olfactory neurosphere cell line		1
osteocyte	1
progenitor cell of endocrine pancreas	1
smooth muscle cell		1
type B pancreatic cell	1

Annotation Matrix

Annotation type

Date released

Available data

Organism

Collection Tags

Biosample type

Organ

Project

Genome assembly (visualization)

Encyclopedia version

type!!

3905 results