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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
28
candidate regulatory elements
19
target gene predictions
15
chromatin state
11
binding sites
6
accessible chromatin
4
histone modifications
1
variant allelic effects
Date released
42
September, 2022
26
February, 2021
6
November, 2021
3
June, 2020
3
October, 2022
2
May, 2021
1
August, 2017
1
February, 2024
Available data
70
bed bed3+
14
bed bed9
3
bigWig
Organism
84
Homo sapiens
Biosample type
46
primary cell
36
cell line
in vitro differentiated cells
2
tissue
Organ
582
epithelium
420
brain
386
kidney
musculature of body
341
connective tissue
309
lung
283
intestine
237
limb
229
heart
217
bodily fluid
206
blood
202
vasculature
190
skin of body
186
pancreas
177
embryo
170
large intestine
159
blood vessel
140
extraembryonic component
122
liver
116
stomach
101
eye
85
bone element
84
mammary gland
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
70
adipose tissue
64
ureter
62
lymph node
60
artery
58
penis
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
18
skeleton
17
mouth
16
bronchus
14
lymphatic vessel
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
Project
78
AMP
6
ENCODE
Genome assembly (visualization)
84
hg19
20
GRCh38
0
hg18
biosample_type!
in vitro differentiated cells
organ_slims!
musculature of body
BIOSAMPLE
TYPE
84 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
variant allelic effects
primary cell
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
1
4
1
fibroblast of mammary gland
2
1
1
2
1
1
myoepithelial cell of mammary gland
4
2
2
luminal epithelial cell of mammary gland
1
3
1
2
cell line
MCF-7
9
6
5
3
1
2
T47D
3
2
2
MCF 10A
3
tissue
mammary gland
1
1
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