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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ATAC-seq
30
ChIP-seq
4
RRBS
2
DNase-seq
1
FAIRE-seq
Assay category
48
DNA accessibility
30
DNA binding
4
DNA methylation
Target of assay
28
histone
28
histone modification
16
narrow histone mark
12
broad histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
54
November, 2017
53
May, 2020
45
February, 2023
40
May, 2021
39
May, 2022
29
August, 2017
20
August, 2021
19
July, 2019
14
March, 2020
6
February, 2021
6
October, 2019
3
January, 2018
3
October, 2022
2
November, 2019
1
April, 2019
1
March, 2019
1
May, 2019
1
November, 2018
Available data
78
bigWig
58
bam
32
bed narrowPeak
29
tagAlign
22
bed broadPeak
8
fastq
4
bed bedMethyl
4
bigBed bedMethyl
4
bigBed narrowPeak
2
bigBed broadPeak
Organism
82
Homo sapiens
Biosample type
50
primary cell
32
tissue
Organ
15
musculature of body
9
liver
7
pancreas
1
adipose tissue
1
connective tissue
Project
82
AMP
Genome assembly (visualization)
536
hg19
GRCh38
Lab
82
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assembly!
GRCh38
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
82 results
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ATAC-seq
ChIP-seq
RRBS
DNase-seq
FAIRE-seq
primary cell
skeletal muscle myoblast
2
1
2
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
+ See 21 more…
tissue
skeletal muscle tissue
13
2
liver
8
1
islet of Langerhans
6
1
subcutaneous abdominal adipose tissue
1
See all biosamples
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