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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
157
candidate regulatory elements
108
target gene predictions
102
accessible chromatin
40
binding sites
38
variant allelic effects
29
histone modifications
3
chromatin state
3
eQTL
1
caQTL
1
gene expression
Date released
166
September, 2022
143
February, 2021
38
February, 2024
30
June, 2020
20
January, 2021
20
May, 2021
15
November, 2022
11
May, 2020
10
February, 2023
8
August, 2021
7
April, 2020
7
October, 2022
3
August, 2017
2
March, 2020
1
February, 2020
1
May, 2022
Available data
478
bed bed3+
57
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
482
Homo sapiens
Biosample type
309
primary cell
121
tissue
31
cell line
21
in vitro differentiated cells
Organ
376
epithelium
288
brain
283
kidney
272
connective tissue
272
musculature of body
230
lung
207
intestine
164
bodily fluid
161
limb
155
blood
155
skin of body
141
heart
129
large intestine
129
pancreas
127
vasculature
125
embryo
109
extraembryonic component
95
blood vessel
92
eye
84
stomach
74
liver
67
mammary gland
63
prostate gland
62
bone element
60
small intestine
54
lymph node
54
penis
54
placenta
49
adipose tissue
48
ureter
47
adrenal gland
37
artery
37
thymus
35
gonad
29
esophagus
29
spinal cord
25
spleen
23
uterus
19
testis
17
lymphoid tissue
16
vein
15
ovary
15
thyroid gland
13
mouth
12
bronchus
12
nerve
11
bone marrow
11
lymphatic vessel
11
pituitary gland
9
breast
7
skeleton
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
455
AMP
20
T1D
7
LungMap
Genome assembly (visualization)
750
hg19
GRCh38
assembly!
GRCh38
BIOSAMPLE
TYPE
482 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
variant allelic effects
histone modifications
chromatin state
eQTL
caQTL
gene expression
primary cell
foreskin keratinocyte
11
4
endothelial cell of umbilical vein
6
4
1
2
1
trophoblast cell
7
5
1
1
endothelial cell
1
4
2
2
1
1
1
1
keratinocyte
3
3
1
1
2
1
+ See 72 more…
tissue
placenta
26
15
1
1
2
pigmented layer of retina
20
chorionic villus
8
4
breast epithelium
5
3
1
esophagus squamous epithelium
6
2
1
+ See 12 more…
cell line
EndoC_BH1
1
7
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
HTR-8/Svneo
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
trophoblast cell
2
2
foreskin keratinocyte
1
1
1
hepatocyte
2
1
mammary gland epithelial cell
1
1
1
+ See 1 more…
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