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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
271
ChIP-seq
Assay category
271
DNA binding
Target of assay
229
transcription factor
65
recombinant protein
32
RNA binding protein
23
histone
23
histone modification
16
control
13
narrow histone mark
11
chromatin remodeller
10
broad histone mark
2
other context
2
other post-translational modification
Date released
574
February, 2021
316
May, 2021
271
November, 2017
260
May, 2020
237
August, 2017
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
69
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
40
September, 2018
39
May, 2022
32
March, 2020
31
February, 2018
30
December, 2018
26
January, 2019
10
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
271
bigWig
270
bam
265
fastq
249
bed narrowPeak
248
bigBed narrowPeak
70
bed broadPeak
64
bigBed broadPeak
18
tagAlign
3
tar
Organism
271
Homo sapiens
Biosample type
256
cell line
9
primary cell
6
tissue
Organ
256
liver
15
brain
6
epithelium
6
vasculature
3
blood vessel
Project
271
AMP
Genome assembly (visualization)
277
GRCh38
271
hg19
Lab
271
AMP-T2D consortium
Audit category:
missing controlled_by
Audit category:
18
inconsistent control read length
assembly!
hg18
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
271 results
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Clear Filters
ChIP-seq
cell line
HepG2
256
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
tissue
cingulate gyrus
2
middle frontal area 46
2
caudate nucleus
1
substantia nigra
1
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