Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
21
candidate regulatory elements
17
target gene predictions
15
chromatin state
10
accessible chromatin
10
histone modifications
6
eQTL
5
binding sites
3
Fine-mapped variants
1
caQTL
Date released
40
September, 2022
19
February, 2021
6
March, 2020
5
August, 2021
4
June, 2020
3
August, 2017
2
May, 2021
2
May, 2022
1
February, 2020
1
January, 2020
1
May, 2024
1
November, 2019
1
November, 2021
1
October, 2022
1
September, 2018
Available data
66
bed bed3+
12
bed bed9
5
bigWig
4
tsv
1
bam
1
bigBed bed9
Organism
88
Homo sapiens
Biosample type
53
tissue
27
cell line
8
primary cell
Organ
epithelium
423
brain
395
connective tissue
387
kidney
367
musculature of body
309
lung
283
intestine
237
limb
231
heart
217
bodily fluid
207
vasculature
206
blood
205
embryo
199
skin of body
186
pancreas
170
large intestine
159
blood vessel
145
extraembryonic component
126
liver
116
stomach
107
eye
87
mammary gland
85
bone element
83
small intestine
80
uterus
76
prostate gland
72
placenta
71
adrenal gland
69
adipose tissue
64
penis
64
ureter
62
lymph node
60
artery
49
thymus
45
gonad
41
spinal cord
40
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
ovary
21
thyroid gland
21
vein
19
lymphatic vessel
18
skeleton
17
mouth
16
bronchus
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
87
AMP
1
ENCODE
Genome assembly (visualization)
88
hg19
27
GRCh38
hg18
assembly!
hg18
organ_slims!
epithelium
BIOSAMPLE
TYPE
88 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
binding sites
Fine-mapped variants
caQTL
tissue
liver
13
10
9
4
2
5
1
1
right lobe of liver
2
1
1
1
3
cell line
HepG2
2
3
2
2
5
2
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
primary cell
hepatic stellate cell
2
1
1
3
1
Download