Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
total RNA-seq
6
ATAC-seq
2
pCHi-C
1
ChIP-seq
Assay category
8
Transcription
6
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
73
May, 2021
44
February, 2021
22
June, 2019
19
November, 2019
18
October, 2019
9
March, 2020
8
May, 2020
6
July, 2018
3
February, 2023
2
December, 2017
2
July, 2019
2
May, 2019
1
June, 2018
Available data
15
bigWig
13
bam
9
tsv
4
bedpe bed3+
hic
2
ibed
1
bed narrowPeak
Organism
17
Homo sapiens
Biosample type
8
primary cell
5
cell line
4
in vitro differentiated cells
Organ
5
epithelium
5
pancreas
Project
10
AMP
7
T1D
Genome assembly (visualization)
17
hg19
9
GRCh38
Lab
13
AMP-T2D consortium
4
Kyle Gaulton, UCSD
Audit category:
17
inconsistent ontology term
files.file_type!
hic
BIOSAMPLE
ASSAY
17 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
pCHi-C
ChIP-seq
primary cell
central memory CD8-positive, alpha-beta T cell
2
2
naive B cel
2
2
cell line
EndoC_BH1
2
2
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
Download