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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
86
ChIP-seq
Assay category
86
DNA binding
Target of assay
52
histone
52
histone modification
34
transcription factor
28
narrow histone mark
24
broad histone mark
6
chromatin remodeller
3
RNA binding protein
Date released
39
August, 2017
32
September, 2018
10
November, 2017
3
October, 2017
2
November, 2018
Available data
86
bam
86
bigWig
86
fastq
48
bed narrowPeak
15
bigBed narrowPeak
14
bed bed3+
3
tagAlign
2
bed broadPeak
Organism
86
Homo sapiens
Biosample type
44
primary cell
25
tissue
12
cell line
5
in vitro differentiated cells
Organ
54
pancreas
21
epithelium
17
connective tissue
12
adipose tissue
12
liver
3
brain
Project
86
AMP
Genome assembly (visualization)
86
hg19
79
GRCh38
Lab
86
AMP-T2D consortium
Audit category:
86
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
files.file_type!
bed bed3
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
86 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
tissue
white adipose tissue
12
islet of Langerhans
10
brain
3
cell line
HepG2
12
in vitro differentiated cells
adipocyte
5
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