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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
Assay category
65
DNA binding
Target of assay
34
transcription factor
31
histone
31
histone modification
17
narrow histone mark
14
broad histone mark
6
chromatin remodeller
3
RNA binding protein
Date released
39
August, 2017
11
September, 2018
10
November, 2017
3
October, 2017
2
November, 2018
Available data
65
bam
65
bigWig
65
fastq
27
bed narrowPeak
15
bigBed narrowPeak
14
bed bed3+
3
tagAlign
2
bed broadPeak
Organism
65
Homo sapiens
Biosample type
25
tissue
23
primary cell
12
cell line
5
in vitro differentiated cells
Organ
54
pancreas
epithelium
17
connective tissue
12
adipose tissue
12
liver
3
brain
Project
65
AMP
Genome assembly (visualization)
65
hg19
58
GRCh38
Lab
65
AMP-T2D consortium
Audit category:
65
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
month_released!
February, 2018
organ_slims!
epithelium
pituitary gland
BIOSAMPLE
ASSAY
65 results
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ChIP-seq
tissue
white adipose tissue
12
islet of Langerhans
10
brain
3
primary cell
pancreatic endocrine cell
23
cell line
HepG2
12
in vitro differentiated cells
adipocyte
5
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