Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
ChIP-seq
33
DNase-seq
22
ATAC-seq
2
FAIRE-seq
Assay category
122
DNA binding
57
DNA accessibility
Target of assay
104
histone
104
histone modification
63
broad histone mark
41
narrow histone mark
18
transcription factor
12
RNA binding protein
Date released
46
April, 2019
40
October, 2018
32
June, 2019
16
August, 2017
16
May, 2019
14
September, 2018
7
October, 2019
5
September, 2017
3
November, 2018
Available data
816
bam
780
bigWig
478
tsv
362
fastq
324
bed narrowPeak
179
bigBed narrowPeak
53
bed bed3+
44
bed broadPeak
32
bigBed broadPeak
17
tagAlign
10
hic
9
bedpe bed3+
4
bed bedMethyl
4
bigBed bedMethyl
3
cool
1
bedpe
Organism
174
Homo sapiens
Biosample type
145
tissue
27
primary cell
7
cell line
Organ
354
liver
97
kidney
91
heart
88
pancreas
84
limb
82
vasculature
78
blood vessel
70
epithelium
65
brain
54
blood
54
bodily fluid
47
musculature of body
27
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
Project
179
AMP
Genome assembly (visualization)
182
GRCh38
179
hg19
Lab
179
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
5
inconsistent control read length
inconsistent assembly
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
179 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
tissue
heart left ventricle
28
3
body of pancreas
26
2
heart
7
16
pancreas
12
2
1
endocrine pancreas
14
+ See 6 more…
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
cardiac fibroblast
3
2
pancreatic acinar cell
5
pancreatic ductal cell
4
cell line
Panc1
6
1
See all biosamples
Download