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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
11
ChIP-seq
Assay category
14
Transcription
11
DNA binding
Target of assay
9
histone
9
histone modification
6
narrow histone mark
3
broad histone mark
2
transcription factor
Date released
10
February, 2018
8
August, 2021
5
December, 2017
2
May, 2021
Available data
26
bam
25
bigWig
16
fastq
14
tsv
11
bed narrowPeak
2
bed bed3+
Organism
25
Homo sapiens
Biosample type
17
in vitro differentiated cells
8
cell line
Organ
589
liver
588
pancreas
561
connective tissue
423
adipose tissue
275
epithelium
173
heart
159
brain
152
vasculature
147
blood vessel
124
kidney
90
limb
85
artery
65
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
25
embryo
18
ureter
15
vein
14
spleen
6
eye
1
pericardium
1
pituitary gland
Project
25
AMP
Genome assembly (visualization)
25
GRCh38
25
hg19
1
hg18
Lab
25
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
inconsistent control read length
audit.WARNING.category!
inconsistent control read length
month_released!
March, 2020
BIOSAMPLE
ASSAY
25 results
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total RNA-seq
ChIP-seq
in vitro differentiated cells
pancreatic endoderm
4
10
Hepatic endoderm
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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