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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
9
DNase-seq
1
FAIRE-seq
Assay category
56
DNA binding
10
DNA accessibility
Target of assay
56
transcription factor
20
RNA binding protein
13
recombinant protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
574
February, 2021
316
May, 2021
260
August, 2017
260
May, 2020
260
November, 2017
217
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
72
September, 2018
66
December, 2017
66
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
46
October, 2018
45
February, 2023
39
May, 2022
32
March, 2020
30
December, 2018
29
February, 2018
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
Available data
66
bam
66
bed narrowPeak
66
bigBed narrowPeak
66
bigWig
66
fastq
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
Organism
66
Homo sapiens
Biosample type
49
cell line
17
tissue
Organ
44
liver
12
blood
12
bodily fluid
4
spleen
3
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
66
AMP
Genome assembly (visualization)
74
GRCh38
66
hg19
Lab
66
AMP-T2D consortium
Audit category:
inconsistent control read length
4
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
month_released!
January, 2021
BIOSAMPLE
ASSAY
66 results
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ChIP-seq
DNase-seq
FAIRE-seq
cell line
HepG2
37
GM12878
12
tissue
liver
4
2
spleen
3
1
body of pancreas
2
brain
2
omental fat pad
1
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