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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
155
candidate regulatory elements
105
target gene predictions
89
chromatin state
65
accessible chromatin
40
binding sites
31
histone modifications
15
variant allelic effects
11
eQTL
6
Fine-mapped variants
2
gene expression
2
pQTL
1
caQTL
Date released
224
September, 2022
140
February, 2021
28
June, 2020
19
February, 2024
19
May, 2021
14
October, 2022
11
August, 2017
11
January, 2020
11
March, 2020
10
May, 2020
8
August, 2021
7
November, 2022
3
April, 2020
3
May, 2022
2
February, 2020
2
January, 2021
2
November, 2020
2
October, 2019
2
September, 2018
2
September, 2023
1
June, 2021
Available data
427
bed bed3+
78
bed bed9
24
bigWig
8
tsv
4
bigBed bed9
1
bigBed narrowPeak
Organism
522
Homo sapiens
Biosample type
204
primary cell
202
tissue
67
cell line
48
in vitro differentiated cells
1
stem cell
Organ
473
epithelium
423
brain
384
kidney
356
musculature of body
337
connective tissue
300
lung
264
intestine
237
limb
219
heart
217
bodily fluid
206
blood
203
embryo
198
vasculature
189
skin of body
168
pancreas
164
large intestine
156
blood vessel
142
extraembryonic component
119
liver
107
stomach
103
eye
84
bone element
81
mammary gland
79
small intestine
78
uterus
76
prostate gland
70
placenta
69
adipose tissue
64
penis
64
ureter
62
lymph node
61
adrenal gland
60
artery
48
thymus
43
gonad
41
spinal cord
36
esophagus
32
spleen
23
lymphoid tissue
23
testis
22
nerve
21
vein
19
ovary
19
thyroid gland
18
skeleton
17
mouth
14
bronchus
13
lymphatic vessel
12
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
Project
513
AMP
ENCODE
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
522
hg19
114
GRCh38
2
hg18
award.project!
ENCODE
BIOSAMPLE
TYPE
522 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
gene expression
pQTL
caQTL
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
osteoblast
2
2
1
5
3
2
fibroblast of dermis
4
4
3
1
+ See 29 more…
tissue
large intestine
27
14
13
1
1
adipose tissue
7
8
6
2
1
1
3
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
omental fat pad
5
2
2
2
1
3
+ See 13 more…
cell line
HT-29
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
fibroblast of cardiac tissue
2
1
2
+ See 16 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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