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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
118
ChIP-seq
Assay category
118
DNA binding
Target of assay
109
histone
109
histone modification
89
narrow histone mark
20
broad histone mark
9
transcription factor
Date released
40
October, 2019
27
May, 2020
20
August, 2017
15
August, 2021
6
November, 2017
5
February, 2021
5
May, 2021
Available data
2828
bigWig
2809
bam
1508
bed narrowPeak
1304
tsv
fastq
963
bigBed narrowPeak
298
bed broadPeak
262
bigBed broadPeak
247
bed bed3+
154
tagAlign
22
hic
21
bedpe bed3+
19
bed bedMethyl
19
bigBed bedMethyl
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
4
txt
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
118
Homo sapiens
Biosample type
93
tissue
17
in vitro differentiated cells
5
cell line
3
primary cell
Organ
37
brain
30
liver
13
musculature of body
8
pancreas
5
epithelium
4
artery
4
blood vessel
4
heart
4
vasculature
1
adipose tissue
1
connective tissue
1
pituitary gland
Project
118
AMP
T1D
Genome assembly (visualization)
130
GRCh38
118
hg19
Lab
118
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
award.project!
T1D
biosample_type!
stem cell
files.file_type!
fastq
BIOSAMPLE
ASSAY
118 results
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ChIP-seq
tissue
liver
27
skeletal muscle tissue
13
islet of Langerhans
6
angular gyrus
2
cingulate gyrus
2
+ See 41 more…
in vitro differentiated cells
neural progenitor cell
12
cardiomyocytes
3
pancreatic PP cell
2
cell line
smooth muscle cell of the coronary artery
4
iPSC derived cell line
1
primary cell
hepatocyte
3
See all biosamples
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