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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
single cell RNA-seq
2
ATAC-seq
1
Hi-C
Assay category
49
Transcription
2
DNA accessibility
1
3D chromatin structure
Date released
574
February, 2021
281
November, 2017
276
August, 2017
217
October, 2019
215
May, 2020
187
June, 2019
180
May, 2021
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
71
November, 2018
65
April, 2019
60
August, 2021
59
November, 2019
49
April, 2018
47
October, 2018
45
February, 2023
39
May, 2022
31
February, 2018
30
December, 2018
27
March, 2020
26
January, 2019
13
October, 2017
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
January, 2018
3
June, 2018
3
March, 2019
3
October, 2022
1
May, 2023
0
January, 2021
Available data
49
bam
49
bigWig
49
tsv
44
fastq
1
bedpe
1
hic
Organism
52
Homo sapiens
Biosample type
43
primary cell
9
tissue
Organ
42
pancreas
33
epithelium
2
connective tissue
Project
52
AMP
Genome assembly (visualization)
52
hg19
51
GRCh38
Lab
49
AMP-T2D consortium
2
Bing Ren, UCSD
1
Mark McCarthy, Oxford
award.project!
T1D
BIOSAMPLE
ASSAY
52 results
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single cell RNA-seq
ATAC-seq
Hi-C
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
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tissue
islet of Langerhans
6
2
1
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