Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
319
candidate regulatory elements
229
target gene predictions
210
histone modifications
204
accessible chromatin
193
chromatin state
98
binding sites
69
variant allelic effects
12
gene expression
9
eQTL
5
caQTL
5
hQTL
3
meQTL
2
sQTL
1
other
Date released
475
September, 2022
329
February, 2021
187
May, 2021
116
February, 2024
74
May, 2020
51
June, 2020
40
May, 2022
27
October, 2022
17
August, 2021
15
January, 2020
9
November, 2022
7
October, 2019
6
August, 2017
2
January, 2022
2
November, 2020
1
June, 2021
1
March, 2020
Available data
1149
bed bed3+
160
bed bed9
124
bigWig
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1314
Homo sapiens
Biosample type
2233
cell line
2146
tissue
1359
primary cell
384
in vitro differentiated cells
3
stem cell
Organ
337
epithelium
180
connective tissue
109
vasculature
90
skin of body
75
blood vessel
58
kidney
41
penis
40
mammary gland
38
musculature of body
37
extraembryonic component
brain
35
liver
34
pancreas
22
lung
21
artery
20
embryo
19
eye
19
vein
16
heart
13
bronchus
11
bone element
10
bone marrow
10
prostate gland
9
blood
9
bodily fluid
8
lymphatic vessel
8
placenta
6
esophagus
5
trachea
4
intestine
4
mouth
4
spinal cord
3
uterus
2
stomach
1
adrenal gland
1
gonad
1
limb
1
thyroid gland
Project
1359
AMP
57
T1D
19
LungMap
Genome assembly (visualization)
1359
hg19
359
GRCh38
month_released!
November, 2021
organ_slims!
brain
BIOSAMPLE
TYPE
1359 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
chromatin state
binding sites
variant allelic effects
gene expression
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
1
86
17
1
1
2
1
common myeloid progenitor, CD34-positive
27
14
13
CD8-positive, alpha-beta T cell
7
3
30
2
1
B cell
14
10
2
8
CD4-positive, alpha-beta memory T cell
14
9
9
+ See 250 more…
See all biosamples
Download