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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
3
DNase-seq
3
total RNA-seq
2
ATAC-seq
1
Hi-C
1
RRBS
Assay category
29
DNA binding
5
DNA accessibility
3
Transcription
1
3D chromatin structure
1
DNA methylation
Target of assay
24
histone
24
histone modification
15
broad histone mark
9
narrow histone mark
5
transcription factor
3
RNA binding protein
Date released
29
April, 2019
5
July, 2019
3
June, 2019
2
March, 2020
Available data
37
bigWig
36
bam
34
bed narrowPeak
31
bigBed narrowPeak
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
3
tsv
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
Organism
39
Homo sapiens
Biosample type
39
tissue
Organ
39
heart
Project
39
AMP
Genome assembly (visualization)
39
hg19
38
GRCh38
Lab
39
AMP-T2D consortium
target.investigated_as!
other post-translational modification
BIOSAMPLE
ASSAY
39 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
Hi-C
RRBS
tissue
heart left ventricle
29
3
3
2
1
1
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