Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 29ChIP-seq
  • 3DNase-seq
  • 3total RNA-seq
  • 2ATAC-seq
  • 1Hi-C
  • 1RRBS
Assay category
  • 29DNA binding
  • 5DNA accessibility
  • 3Transcription
  • 13D chromatin structure
  • 1DNA methylation
Target of assay
  • 24histone
  • 24histone modification
  • 15broad histone mark
  • 9narrow histone mark
  • 5transcription factor
  • 3RNA binding protein
Date released
  • 29April, 2019
  • 5July, 2019
  • 3June, 2019
  • 2March, 2020
Available data
  • 37bigWig
  • 36bam
  • 34bed narrowPeak
  • 31bigBed narrowPeak
  • 3bed bed3+
  • 3bed broadPeak
  • 3bigBed broadPeak
  • 3tsv
  • 1bed bedMethyl
  • 1bedpe bed3+
  • 1bigBed bedMethyl
  • 1hic
Organism
  • 39Homo sapiens
Biosample type
  • 39tissue
Organ
  • 39heart
Project
  • 39AMP
Genome assembly (visualization)
  • 39hg19
  • 38GRCh38
Lab
  • 39AMP-T2D consortium
BIOSAMPLE
ASSAY

39 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
Hi-C
RRBS
tissue
heart left ventricle2933211
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego