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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
147
total RNA-seq
83
ChIP-seq
20
ATAC-seq
2
DNase-seq
1
Hi-C
1
RRBS
1
small RNA-seq
Assay category
148
Transcription
83
DNA binding
22
DNA accessibility
1
3D chromatin structure
1
DNA methylation
Target of assay
45
histone modification
44
histone
37
transcription factor
34
narrow histone mark
10
broad histone mark
2
chromatin remodeller
1
RNA binding protein
1
control
Date released
170
May, 2020
29
December, 2017
20
May, 2022
19
August, 2017
6
November, 2018
6
October, 2019
3
July, 2019
2
March, 2020
Available data
252
bigWig
233
bam
148
tsv
104
bed narrowPeak
54
fastq
40
bigBed narrowPeak
27
tagAlign
5
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
Organism
255
Homo sapiens
Biosample type
255
tissue
Organ
255
liver
Project
255
AMP
Genome assembly (visualization)
255
hg19
225
GRCh38
Lab
235
AMP-T2D consortium
20
Karen Mohlke, UNC
Audit category:
27
inconsistent control
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
255 results
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total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
Hi-C
RRBS
small RNA-seq
tissue
liver
147
83
20
2
1
1
1
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