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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
single cell RNA-seq
10
total RNA-seq
7
ChIP-seq
6
ATAC-seq
1
Hi-C
Assay category
22
Transcription
7
DNA binding
6
DNA accessibility
1
3D chromatin structure
Target of assay
7
histone
7
histone modification
4
narrow histone mark
3
broad histone mark
Date released
13
September, 2018
8
August, 2017
7
July, 2018
3
April, 2018
2
August, 2018
2
September, 2017
1
October, 2022
Available data
35
bam
35
bigWig
35
fastq
22
tsv
13
bed narrowPeak
6
bigBed narrowPeak
1
bedpe bed3+
1
cool
1
hic
Organism
36
Homo sapiens
Biosample type
36
primary cell
Organ
36
epithelium
36
pancreas
Project
35
AMP
1
HPAP
Genome assembly (visualization)
42
GRCh38
36
hg19
Lab
35
AMP-T2D consortium
1
Klaus Kaestner, Upenn
Audit category:
1
audit script error
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
36 results
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single cell RNA-seq
total RNA-seq
ChIP-seq
ATAC-seq
Hi-C
primary cell
pancreatic alpha cell
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