Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
single cell RNA-seq
10
total RNA-seq
7
ATAC-seq
7
ChIP-seq
1
Hi-C
Assay category
22
Transcription
7
DNA accessibility
7
DNA binding
1
3D chromatin structure
Target of assay
7
histone
7
histone modification
4
narrow histone mark
3
broad histone mark
Date released
14
September, 2018
9
July, 2018
8
August, 2017
3
April, 2018
2
September, 2017
1
October, 2022
Available data
36
bam
36
bigWig
36
fastq
22
tsv
14
bed narrowPeak
7
bigBed narrowPeak
1
bedpe bed3+
1
cool
1
hic
Organism
37
Homo sapiens
Biosample type
37
primary cell
Organ
37
epithelium
37
pancreas
Project
36
AMP
1
HPAP
Genome assembly (visualization)
39
GRCh38
37
hg19
Lab
36
AMP-T2D consortium
1
Klaus Kaestner, Upenn
Audit category:
1
audit script error
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
37 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
total RNA-seq
ATAC-seq
ChIP-seq
Hi-C
primary cell
pancreatic beta cell
12
10
7
7
1
Download