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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ATAC-seq
15
ChIP-seq
1
snATAC-seq
Assay category
39
DNA accessibility
15
DNA binding
Target of assay
9
histone
9
histone modification
7
narrow histone mark
3
RNA binding protein
3
control
3
transcription factor
2
broad histone mark
Date released
481
February, 2021
311
May, 2021
276
August, 2017
260
May, 2020
197
October, 2019
187
June, 2019
164
July, 2018
97
May, 2019
91
July, 2019
77
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
October, 2018
45
February, 2023
45
November, 2019
39
May, 2022
37
August, 2021
31
February, 2018
25
March, 2020
17
November, 2018
15
November, 2017
13
October, 2017
7
September, 2017
6
January, 2019
6
November, 2020
5
December, 2019
3
August, 2018
3
December, 2018
3
June, 2018
3
March, 2019
3
October, 2022
2
January, 2018
1
May, 2023
Available data
50
bed narrowPeak
35
bigWig
32
bam
27
fastq
12
bed broadPeak
11
bigBed narrowPeak
6
bigBed broadPeak
6
tagAlign
1
bed bed3+
1
txt
Organism
54
Homo sapiens
Biosample type
cell line
45
tissue
9
primary cell
Organ
20
liver
18
pancreas
15
brain
6
epithelium
6
vasculature
3
blood vessel
1
musculature of body
Project
54
AMP
Genome assembly (visualization)
63
GRCh38
54
hg19
Lab
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
16
AMP-T2D consortium
Audit category:
1
audit script error
biosample_type!
cell line
BIOSAMPLE
ASSAY
54 results
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Clear Filters
ATAC-seq
ChIP-seq
snATAC-seq
tissue
liver
20
islet of Langerhans
18
cingulate gyrus
2
middle frontal area 46
2
caudate nucleus
1
+ See 2 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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