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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
3
single cell RNA-seq
Assay category
22
DNA binding
3
Transcription
Target of assay
609
histone
609
histone modification
425
transcription factor
323
narrow histone mark
286
broad histone mark
90
RNA binding protein
85
recombinant protein
32
chromatin remodeller
25
control
5
other context
5
other post-translational modification
Date released
16
November, 2017
3
July, 2019
3
May, 2021
August, 2017
2
September, 2017
1
December, 2017
Available data
22
bam
22
bigWig
19
fastq
3
bed bed3+
3
tsv
1
tagAlign
Organism
25
Homo sapiens
Biosample type
13
cell line
9
primary cell
in vitro differentiated cells
2
tissue
1
stem cell
Organ
13
liver
6
brain
2
epithelium
2
pancreas
2
vasculature
1
blood vessel
Project
25
AMP
Genome assembly (visualization)
25
hg19
6
GRCh38
Lab
22
AMP-T2D consortium
3
Kyle Gaulton, UCSD
biosample_type!
in vitro differentiated cells
month_released!
August, 2017
August, 2020
BIOSAMPLE
ASSAY
25 results
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ChIP-seq
single cell RNA-seq
cell line
HepG2
13
primary cell
CD8-positive, alpha-beta T cell
3
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
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tissue
islet of Langerhans
2
stem cell
hESC
1
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