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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1343
candidate regulatory elements
985
target gene predictions
766
histone modifications
716
binding sites
288
accessible chromatin
72
Fine-mapped variants
54
eQTL
48
variant allelic effects
42
chromatin state
3
pQTL
2
variant to gene
1
caQTL
1
other
1
sQTL
Date released
2068
February, 2021
1350
September, 2022
236
June, 2020
177
February, 2024
116
March, 2020
106
May, 2021
70
October, 2022
50
August, 2021
47
May, 2020
29
August, 2017
25
February, 2020
21
November, 2022
9
May, 2022
7
February, 2023
5
September, 2023
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2020
1
November, 2019
Available data
4326
bed bed3+
bed bed9
bigWig
96
tsv
36
bigBed bed9
7
bed bed9+
1
bam
Organism
4320
Homo sapiens
Biosample type
2127
cell line
1854
tissue
primary cell
335
in vitro differentiated cells
4
stem cell
Organ
313
brain
246
musculature of body
241
kidney
209
lung
205
intestine
183
bodily fluid
174
blood
172
limb
160
embryo
145
heart
131
large intestine
128
connective tissue
84
pancreas
82
skin of body
82
stomach
80
extraembryonic component
78
epithelium
71
uterus
69
liver
62
vasculature
60
small intestine
56
adipose tissue
55
blood vessel
55
prostate gland
54
lymph node
50
bone element
48
ureter
47
eye
47
placenta
46
adrenal gland
37
thymus
34
gonad
34
mammary gland
30
spinal cord
27
artery
25
spleen
24
esophagus
19
penis
19
testis
18
lymphoid tissue
16
nerve
15
ovary
14
thyroid gland
11
pituitary gland
10
mouth
9
breast
7
skeleton
7
tongue
7
urinary bladder
6
vagina
4
lymphatic vessel
3
nose
2
vein
Project
4316
AMP
5
ITG
1
T1D
Genome assembly (visualization)
4322
hg19
364
GRCh38
4
hg18
biosample_type!
primary cell
files.file_type!
bed bed9
bigWig
BIOSAMPLE
TYPE
4322 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
Fine-mapped variants
eQTL
variant allelic effects
chromatin state
pQTL
variant to gene
caQTL
other
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 760 more…
tissue
stomach
40
21
1
3
heart
37
20
1
1
2
2
brain
29
16
3
1
1
1
lung
33
17
muscle of arm
33
16
1
+ See 206 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
3
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 99 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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