Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
553
ChIP-seq
Assay category
553
DNA binding
Target of assay
554
histone modification
553
histone
477
transcription factor
299
narrow histone mark
253
broad histone mark
90
RNA binding protein
85
recombinant protein
35
chromatin remodeller
22
control
5
other context
5
other post-translational modification
Date released
153
October, 2019
89
May, 2019
84
August, 2017
60
April, 2019
30
December, 2017
30
October, 2018
27
May, 2020
21
November, 2017
16
February, 2018
15
August, 2021
10
November, 2019
7
January, 2019
6
October, 2017
3
March, 2020
2
May, 2021
Available data
551
bigWig
546
bed narrowPeak
526
bam
292
bigBed narrowPeak
154
fastq
129
tagAlign
49
bed broadPeak
22
bed bed3+
14
bigBed broadPeak
1
tagAlign bed3+
Organism
547
Homo sapiens
Biosample type
437
tissue
primary cell
77
in vitro differentiated cells
37
cell line
2
stem cell
Organ
114
brain
84
pancreas
79
liver
60
heart
54
blood vessel
54
vasculature
48
limb
27
connective tissue
27
epithelium
24
nerve
20
artery
20
kidney
19
musculature of body
11
embryo
6
spleen
2
adipose tissue
1
blood
1
bodily fluid
1
pituitary gland
Project
549
AMP
4
T1D
Genome assembly (visualization)
605
GRCh38
553
hg19
Lab
550
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
16
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
26
inconsistent control read length
1
inconsistent assembly
biosample_type!
primary cell
files.file_type!
csv
BIOSAMPLE
ASSAY
553 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
liver
44
heart left ventricle
24
tibial nerve
24
islet of Langerhans
22
kidney
20
+ See 99 more…
in vitro differentiated cells
adipocyte
25
hepatocyte
12
neural progenitor cell
12
pancreatic endoderm
9
definitive endodermal cell
4
+ See 7 more…
cell line
HepG2
18
EndoC_BH1
12
Panc1
6
GM12878
1
stem cell
hESC
2
See all biosamples
Download