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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
126
ChIP-seq
9
DNase-seq
1
FAIRE-seq
Assay category
126
DNA binding
10
DNA accessibility
Target of assay
66
transcription factor
60
histone
60
histone modification
37
broad histone mark
24
RNA binding protein
23
narrow histone mark
13
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
571
February, 2021
272
November, 2017
229
August, 2017
191
October, 2019
170
May, 2020
147
June, 2019
132
May, 2021
116
July, 2018
93
May, 2019
77
December, 2017
71
November, 2018
65
April, 2019
60
July, 2019
59
November, 2019
57
August, 2021
45
October, 2018
42
February, 2023
38
May, 2022
31
February, 2018
31
March, 2020
30
December, 2018
26
January, 2019
13
October, 2017
6
April, 2018
3
January, 2018
3
March, 2019
2
September, 2017
1
May, 2023
Available data
136
bed narrowPeak
136
bigWig
135
bam
135
bigBed narrowPeak
71
fastq
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
Organism
136
Homo sapiens
Biosample type
82
tissue
54
cell line
Organ
49
liver
47
heart
18
kidney
12
blood
12
bodily fluid
4
spleen
3
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
136
AMP
Genome assembly (visualization)
143
GRCh38
136
hg19
Lab
136
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
biosample_type!
primary cell
files.file_type!
txt
BIOSAMPLE
ASSAY
136 results
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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
heart left ventricle
29
kidney
18
heart right ventricle
11
heart
7
liver
4
2
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cell line
HepG2
42
GM12878
12
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