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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ChIP-seq
3
ATAC-seq
3
DNase-seq
1
RRBS
Assay category
77
DNA binding
6
DNA accessibility
1
DNA methylation
Target of assay
52
histone
52
histone modification
29
narrow histone mark
24
transcription factor
22
broad histone mark
6
RNA binding protein
3
chromatin remodeller
1
control
Date released
263
November, 2017
189
May, 2021
117
February, 2021
90
May, 2020
84
August, 2017
72
September, 2018
54
November, 2018
54
October, 2019
48
July, 2018
44
August, 2021
43
April, 2018
41
December, 2017
37
June, 2019
31
February, 2018
30
July, 2019
27
December, 2018
20
January, 2019
19
November, 2019
14
March, 2020
12
February, 2023
6
November, 2020
5
December, 2019
5
September, 2017
4
May, 2019
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
January, 2018
Available data
95
bam
95
fastq
94
bigWig
76
bed narrowPeak
20
bigBed narrowPeak
15
bed broadPeak
15
bigBed broadPeak
tagAlign
7
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
Organism
84
Homo sapiens
Biosample type
tissue
49
in vitro differentiated cells
35
primary cell
Organ
49
connective tissue
29
pancreas
17
epithelium
Project
84
AMP
Genome assembly (visualization)
84
hg19
80
GRCh38
Lab
84
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
11
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
biosample_type!
tissue
files.file_type!
tagAlign
organ_slims!
eye
BIOSAMPLE
ASSAY
84 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
RRBS
in vitro differentiated cells
adipocyte
48
1
primary cell
pancreatic endocrine cell
12
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
skeletal muscle myoblast
3
2
1
pancreatic acinar cell
1
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