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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
total RNA-seq
36
DNase-seq
34
ChIP-seq
14
ATAC-seq
Assay category
62
Transcription
50
DNA accessibility
34
DNA binding
Target of assay
48
histone
48
histone modification
34
broad histone mark
narrow histone mark
Date released
66
February, 2021
40
October, 2019
32
June, 2019
4
February, 2023
4
May, 2019
Available data
142
bam
134
bigWig
80
bed narrowPeak
70
bigBed narrowPeak
62
tsv
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
4
bed bed3
Organism
146
Homo sapiens
Biosample type
146
tissue
Organ
480
connective tissue
422
adipose tissue
385
pancreas
232
liver
90
heart
82
kidney
82
limb
70
bone element
54
brain
54
musculature of body
52
blood vessel
52
vasculature
30
eye
23
nerve
21
artery
18
ureter
12
epithelium
12
skeleton
12
spleen
1
pericardium
Project
146
AMP
Genome assembly (visualization)
146
hg19
143
GRCh38
Lab
146
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
146 results
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total RNA-seq
DNase-seq
ChIP-seq
ATAC-seq
tissue
bone tissue
58
tibial nerve
4
2
16
1
muscle of arm
17
muscle of leg
13
4
tibial artery
2
14
1
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