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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
162
ChIP-seq
53
DNase-seq
9
ATAC-seq
9
total RNA-seq
4
small RNA-seq
1
FAIRE-seq
1
RRBS
Assay category
162
DNA binding
63
DNA accessibility
13
Transcription
1
DNA methylation
Target of assay
162
histone
162
histone modification
103
narrow histone mark
59
broad histone mark
Date released
130
October, 2019
47
June, 2019
31
May, 2019
10
July, 2019
6
February, 2021
6
November, 2017
6
October, 2017
2
November, 2018
1
February, 2023
Available data
234
bam
229
bigWig
222
bed narrowPeak
138
bigBed narrowPeak
62
bed broadPeak
53
bed bed3+
53
bigBed broadPeak
43
tagAlign
13
tsv
8
fastq
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
tagAlign bed3+
Organism
239
Homo sapiens
Biosample type
239
tissue
21
primary cell
Organ
482
connective tissue
424
adipose tissue
413
pancreas
268
liver
143
brain
113
heart
96
limb
92
kidney
70
blood vessel
70
bone element
70
vasculature
61
musculature of body
31
nerve
30
eye
27
artery
18
ureter
14
spleen
12
epithelium
12
skeleton
1
pericardium
1
pituitary gland
Project
239
AMP
Genome assembly (visualization)
299
GRCh38
239
hg19
Lab
239
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
3
missing controlled_by
BIOSAMPLE
ASSAY
239 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
small RNA-seq
FAIRE-seq
RRBS
tissue
tibial nerve
24
2
1
4
brain
11
14
1
1
1
tibial artery
18
2
1
muscle of leg
6
13
muscle of arm
17
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